10 homologs were found in PanDaTox collection
for query gene Jden_2165 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_2165  hypothetical protein  100 
 
 
593 aa  1212    Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.122295 
 
 
-
 
NC_009380  Strop_0547  Phage terminase protein large subunit-like protein  40.19 
 
 
574 aa  359  9e-98  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4221  Terminase  37.57 
 
 
526 aa  330  7e-89  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.329871  normal  0.306119 
 
 
-
 
NC_009664  Krad_1723  phage Terminase  36.26 
 
 
587 aa  322  1.9999999999999998e-86  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5620  Terminase  25.66 
 
 
537 aa  79.3  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3106  hypothetical protein  31.79 
 
 
228 aa  56.6  0.000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2914  phage terminase  25.1 
 
 
489 aa  55.8  0.000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2958  phage terminase  25.1 
 
 
489 aa  55.8  0.000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.911038 
 
 
-
 
NC_013721  HMPREF0424_0983  hypothetical protein  29.73 
 
 
202 aa  51.6  0.00004  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.597017 
 
 
-
 
NC_014158  Tpau_3893  Terminase  28.93 
 
 
489 aa  48.1  0.0004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
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