8 homologs were found in PanDaTox collection
for query gene Hlac_R0007 on replicon NC_012029
Organism: Halorubrum lacusprofundi ATCC 49239



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012029  Hlac_R0007  tRNA-Pro  100 
 
 		 71 bp  141  1.9999999999999998e-32  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  decreased coverage  0.000136708 
 
 
-
 
NC_013202  Hmuk_R0023  tRNA-Pro  90.41 
 
 		 73 bp  83.8  0.000000000000005  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.122504 
 
 
-
 
NC_013743  Htur_R0002  tRNA-Pro  90.41 
 
 		 73 bp  83.8  0.000000000000005  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_R0032  tRNA-Pro  90.41 
 
 		 73 bp  83.8  0.000000000000005  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_R0035  tRNA-Gln  100 
 
 		 73 bp  50.1  0.00007  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_R0038  tRNA-Gln  100 
 
 		 73 bp  46.1  0.001  Methanosphaerula palustris E1-9c  Archaea  normal  0.0250632  normal  1 
 
 
-
 
NC_013926  Aboo_R0015  tRNA-Val  96.15 
 
 		 76 bp  44.1  0.004  Aciduliprofundum boonei T469  Archaea  normal  0.0118256  n/a   
 
 
-
 
NC_013926  Aboo_R0023  tRNA-Val  96.15 
 
 		 74 bp  44.1  0.004  Aciduliprofundum boonei T469  Archaea  normal  0.494525  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>