5 homologs were found in PanDaTox collection
for query gene Htur_R0002 on replicon NC_013743
Organism: Haloterrigena turkmenica DSM 5511



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013743  Htur_R0002  tRNA-Pro  100 
 
 
73 bp  145  2e-33  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_R0023  tRNA-Pro  98.63 
 
 
73 bp  137  4e-31  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.122504 
 
 
-
 
NC_013922  Nmag_R0032  tRNA-Pro  98.63 
 
 
73 bp  137  4e-31  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012029  Hlac_R0007  tRNA-Pro  90.41 
 
 
71 bp  83.8  0.000000000000005  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  decreased coverage  0.000136708 
 
 
-
 
NC_013158  Huta_R0033  tRNA-Pro  86.3 
 
 
73 bp  65.9  0.000000001  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
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