6 homologs were found in PanDaTox collection
for query gene HS_0560 on replicon NC_008309
Organism: Haemophilus somnus 129PT



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008309  HS_0560  type I restriction enzyme, specificity subunit  100 
 
 
192 aa  382  1e-105  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2473  hypothetical protein  34.03 
 
 
228 aa  72.4  0.000000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  0.521853  n/a   
 
 
-
 
NC_008043  TM1040_3540  restriction modification system DNA specificity subunit  31.75 
 
 
387 aa  42.7  0.003  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1805  restriction modification system DNA specificity domain protein  29 
 
 
423 aa  42  0.006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.745604  normal  0.535567 
 
 
-
 
NC_008599  CFF8240_0991  restriction modification system DNA specificity subunit  28.7 
 
 
195 aa  41.6  0.007  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.603611  n/a   
 
 
-
 
NC_009513  Lreu_0873  restriction modification system DNA specificity subunit  33.33 
 
 
375 aa  41.6  0.008  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
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