Gene HS_0560 details

Gene Information

• Locus tag: HS_0560
• Symbol: hsdS
• ID: 4240043
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 596416
• End bp: 596994
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638104109
• Product: type I restriction enzyme, specificity subunit
• Protein accession: YP_718771
• Protein GI: 113460705

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTTAA GTAATATTGT GGAGATCAGC AGCGGACAGG CACAGTTTCG TATTTCCGAA 
GTCAGTGATC CGATTGCACC TGTTTATACT TATTATAGTC AGGCAAACTT AGAACAAGAT 
CTCTATTTAT CTGATGGTTC AGCAGTACTT CCTAAAGAAA TAAAAACTTT TGATAAAATA 
ACCAGTTTAC TTTCCACTGG TGATGTGATT TTTAGTCTGA TTTCAGGTAA GGCAACGATT 
GTCAGCAAAC AACACCAAGG TTTTTTATAT ACTCAAAATT ACGTTAAGTT AATACCTAAA 
AATCAGATAG ATGCCAATTA TTTAGTCTAT TTATTAAACG AAAATGCGGT GGTTAAAAAG 
CAGTTAAGTC GTGGTTTGCA AGGATCTCAA GTATTGAAAT ATACAACTAA TCAGCTGAAA 
TCATTGAGAT TACCCAAATT ACCCCACTTA TCGGAACAAC GTTTAATGGG AGAGATTTAC 
CTAAAACAAC AAAAATTAGC TTATCTCAAA CAACGCATAG CGAATTTAGA AAAATTACTT 
GTGTTACACC AATTGCAAAA GCGAGTACAG CATGACTAA 

 

Protein sequence

MLLSNIVEIS SGQAQFRISE VSDPIAPVYT YYSQANLEQD LYLSDGSAVL PKEIKTFDKI 
TSLLSTGDVI FSLISGKATI VSKQHQGFLY TQNYVKLIPK NQIDANYLVY LLNENAVVKK 
QLSRGLQGSQ VLKYTTNQLK SLRLPKLPHL SEQRLMGEIY LKQQKLAYLK QRIANLEKLL 
VLHQLQKRVQ HD