5 homologs were found in PanDaTox collection
for query gene HMPREF0424_0728 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_0728  hypothetical protein  100 
 
 
66 aa  134  6.0000000000000005e-31  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00271301 
 
 
-
 
NC_013721  HMPREF0424_0494  resolvase, N-terminal domain protein  75.38 
 
 
321 aa  101  3e-21  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.177718 
 
 
-
 
NC_013721  HMPREF0424_0528  hypothetical protein  87.88 
 
 
163 aa  57.4  0.00000006  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.000114476 
 
 
-
 
NC_011898  Ccel_2698  hypothetical protein  42.31 
 
 
194 aa  44.7  0.0004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3888  Recombinase  40 
 
 
210 aa  40.4  0.009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.142462 
 
 
-
 
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