| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0494 |
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| Symbol | |
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| ID | 8709311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 540703 |
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| End bp | 541668 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482608 |
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| Product | resolvase, N-terminal domain protein |
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| Protein accession | YP_003373735 |
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| Protein GI | 283782981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.177718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA TAGATGAGCT AAATAAAGAT GTGATAGTCA TCCATCCTCA GCGGGTGATT
AAGGATTATG CGGTTGGGGT TTATGCTCGT GTGAGCACAA ATCGTAAAGA ACAGCTGGAT
AGCCTTGCTG TTCAGGTGTC TGGTCTTACT CGTCTTGCTG CTGCTCACAT GACTTGGTTT
GTTGCAGATA TTTTTCTTGA TGTTGCTTCA GCTAAGGTTG GATCTTCAAG AAACGAGTTT
AATCGAATGA TTGAAGAATG CGAGAAAGGT AATCTTGATA TTATTCTTAC TAAAAGTGTG
AGCCGTTTTG GTCGTGATAC GAAAGAAGGC TTAGAGGCTA TTAGAAAGAT TCGATCATGT
GGCACGAGAA TTATCTTTGA GACAGATAAA ATTGATACGG AAACTGTCGA TGATGAACTT
TTAATCAGTG TGGTTCAAGC TTGTAGTCAA GCAGAGAATG ATTGGCGTAG CGAGAATATT
GTTTGGGGAT TAAGACGTAG AGCAGAAGAT GGCACGTCGG GTCTTTATAG CAGGGCTTGT
TATGGTTATA AGAAAGATAA GCATGGCATG CTGATTATTG ATGAAGACCA AGCACAAGTG
GTAAGAGATA TTTTTGACTG GTATTTAAAA GGATTAAGTA TCGGCGGTAT TATTAAAAGG
TTAAAAAGTA GAGGTGTTAA GTCTCCCAAG GGGAAAGACG TTTGGAGTAA ACGGGCTGTT
GAGAGTACTT TGACTAGGTG TAAATATACA GGCGATGTGG CGATTGCTGT TCCGGGAAAT
GCGGATTGTC AGTATTTGTA TTCGGATCAT CATTCCGGAA TTATTTCTAA AGAAACGTTT
GAAGCCGTTG AGCTTGAGAT GGCGGCTCGG AGTAATATGG AAGTTGGAGA GGACGGAACG
GTGCGTAGAA AGAATAAAAA GTATAGTGCT AAAACGAGTA GAAAGGATAA CTTAAATGAA
TTGTAG
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| Protein sequence | MDKIDELNKD VIVIHPQRVI KDYAVGVYAR VSTNRKEQLD SLAVQVSGLT RLAAAHMTWF
VADIFLDVAS AKVGSSRNEF NRMIEECEKG NLDIILTKSV SRFGRDTKEG LEAIRKIRSC
GTRIIFETDK IDTETVDDEL LISVVQACSQ AENDWRSENI VWGLRRRAED GTSGLYSRAC
YGYKKDKHGM LIIDEDQAQV VRDIFDWYLK GLSIGGIIKR LKSRGVKSPK GKDVWSKRAV
ESTLTRCKYT GDVAIAVPGN ADCQYLYSDH HSGIISKETF EAVELEMAAR SNMEVGEDGT
VRRKNKKYSA KTSRKDNLNE L
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