11 homologs were found in PanDaTox collection
for query gene Gobs_4275 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_4275  hypothetical protein  100 
 
 
242 aa  441  1e-123  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.162006  n/a   
 
 
-
 
NC_009921  Franean1_5836  hypothetical protein  56.72 
 
 
411 aa  67.4  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  0.425484  normal  0.644094 
 
 
-
 
NC_007777  Francci3_0769  hypothetical protein  49.23 
 
 
439 aa  60.5  0.00000003  Frankia sp. CcI3  Bacteria  normal  0.0668153  normal 
 
 
-
 
NC_013530  Xcel_2503  hypothetical protein  53.03 
 
 
292 aa  59.3  0.00000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1756  hypothetical protein  30.8 
 
 
259 aa  58.5  0.00000009  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.763596 
 
 
-
 
NC_008541  Arth_2704  hypothetical protein  32.55 
 
 
264 aa  58.2  0.0000001  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00973242  n/a   
 
 
-
 
NC_011886  Achl_2435  hypothetical protein  49.15 
 
 
313 aa  55.1  0.0000009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0124023 
 
 
-
 
NC_009664  Krad_3805  hypothetical protein  48.1 
 
 
229 aa  54.7  0.000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0179227  normal  0.710342 
 
 
-
 
NC_012669  Bcav_1254  hypothetical protein  51.61 
 
 
311 aa  53.1  0.000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.100866 
 
 
-
 
NC_014151  Cfla_2323  Peptidoglycan-binding lysin domain protein  50 
 
 
309 aa  49.3  0.00005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.121669  hitchhiker  0.0000988538 
 
 
-
 
NC_012803  Mlut_14680  hypothetical protein  48.33 
 
 
250 aa  48.9  0.00007  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
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