50 homologs were found in PanDaTox collection
for query gene Gbem_2681 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2681  nucleotidyltransferase substrate binding protein, HI0074 family  100 
 
 
136 aa  281  2.0000000000000002e-75  Geobacter bemidjiensis Bem  Bacteria  normal  0.485483  n/a   
 
 
-
 
NC_012918  GM21_1559  nucleotidyltransferase substrate binding protein, HI0074 family  93.02 
 
 
43 aa  87  7e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010718  Nther_2574  nucleotidyltransferase substrate binding protein, HI0074 family  37.4 
 
 
133 aa  86.3  1e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0898104  normal 
 
 
-
 
NC_013411  GYMC61_0806  nucleotidyltransferase substrate binding protein, HI0074 family  40 
 
 
247 aa  84.7  4e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0764  nucleotidyltransferase substrate binding protein, HI0074 family  36.07 
 
 
133 aa  84.3  5e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.537775  n/a   
 
 
-
 
NC_010814  Glov_3593  nucleotidyltransferase substrate binding protein, HI0074 family  39.09 
 
 
133 aa  79.7  0.00000000000001  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00156598  n/a   
 
 
-
 
NC_008639  Cpha266_0291  HI0074 family nucleotidyltransferase substrate binding protein  37.5 
 
 
149 aa  75.1  0.0000000000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4506  HI0074 family nucleotidyltransferase substrate binding protein  37.61 
 
 
146 aa  73.2  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0839555 
 
 
-
 
NC_011146  Gbem_1476  nucleotidyltransferase substrate binding protein, HI0074 family  33.86 
 
 
140 aa  72  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1673  nucleotidyltransferase substrate binding protein  35.65 
 
 
134 aa  71.2  0.000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.659864  n/a   
 
 
-
 
NC_009975  MmarC6_0050  HI0074 family nucleotidyltransferase substrate binding protein  37.74 
 
 
133 aa  71.2  0.000000000005  Methanococcus maripaludis C6  Archaea  normal  0.0191135  n/a   
 
 
-
 
NC_010803  Clim_0232  nucleotidyltransferase substrate binding protein, HI0074 family  39.39 
 
 
141 aa  69.3  0.00000000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2847  hypothetical protein  32.58 
 
 
139 aa  68.6  0.00000000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010730  SYO3AOP1_1569  nucleotidyltransferase substrate binding protein, HI0074 family  38.3 
 
 
124 aa  67.8  0.00000000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1039  HI0074 family nucleotidyltransferase substrate binding protein  39.08 
 
 
135 aa  68.2  0.00000000004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00506895  n/a   
 
 
-
 
NC_009767  Rcas_1208  HI0074 family nucleotidyltransferase substrate binding protein  33.85 
 
 
140 aa  67.4  0.00000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0271  hypothetical protein  42.42 
 
 
139 aa  67.4  0.00000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  0.20168  n/a   
 
 
-
 
NC_012034  Athe_1136  nucleotidyltransferase substrate binding protein, HI0074 family  33.33 
 
 
127 aa  67  0.00000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1773  nucleotidyltransferase substrate binding protein, HI0074 family  38.04 
 
 
129 aa  66.6  0.0000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0768  nucleotidyltransferase substrate binding protein, HI0074 family  35 
 
 
134 aa  64.3  0.0000000005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_1134  HI0074 family nucleotidyltransferase substrate binding protein  34.86 
 
 
139 aa  64.3  0.0000000006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0753  nucleotidyltransferase substrate binding protein, HI0074 family  37.14 
 
 
134 aa  63.9  0.0000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0068  nucleotidyltransferase substrate binding protein, HI0074 family  36.84 
 
 
199 aa  63.2  0.000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0094  HI0074 family nucleotidyltransferase substrate binding protein  35.34 
 
 
137 aa  62  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.257983 
 
 
-
 
NC_012793  GWCH70_1380  nucleotidyltransferase substrate binding protein, HI0074 family  28.33 
 
 
152 aa  62  0.000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3506  HI0074 family nucleotidyltransferase substrate binding protein  37.97 
 
 
141 aa  61.2  0.000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1690  nucleotidyltransferase substrate binding protein, HI0074 family  33.64 
 
 
135 aa  61.2  0.000000005  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.0359217 
 
 
-
 
NC_007484  Noc_2905  nucleotidyltransferase substrate-binding protein  33.91 
 
 
139 aa  61.2  0.000000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2654  HI0074 family nucleotidyltransferase substrate binding protein  31.2 
 
 
151 aa  59.7  0.00000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.888693  n/a   
 
 
-
 
NC_013173  Dbac_1655  nucleotidyltransferase substrate binding protein, HI0074 family  32.28 
 
 
140 aa  58.9  0.00000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.834334  n/a   
 
 
-
 
NC_007498  Pcar_0898  hypothetical protein  38.96 
 
 
136 aa  58.2  0.00000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0348  nucleotidyltransferase substrate binding protein, HI0074 family  34.02 
 
 
132 aa  57.4  0.00000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.46412  n/a   
 
 
-
 
NC_008346  Swol_0220  nucleotidyltransferase substrate-binding protein, putative  34.26 
 
 
140 aa  57  0.00000009  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4036  HI0074 family nucleotidyltransferase substrate binding protein  32.69 
 
 
149 aa  56.6  0.0000001  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3009  HI0074 family nucleotidyltransferase substrate binding protein  32.56 
 
 
137 aa  56.6  0.0000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.549001  normal 
 
 
-
 
NC_007484  Noc_2536  nucleotidyltransferase substrate-binding protein  39.09 
 
 
138 aa  56.6  0.0000001  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00079468  n/a   
 
 
-
 
NC_012793  GWCH70_2026  nucleotidyltransferase substrate binding protein, HI0074 family  27.36 
 
 
150 aa  56.6  0.0000001  Geobacillus sp. WCH70  Bacteria  normal  0.0157738  n/a   
 
 
-
 
NC_012918  GM21_2646  nucleotidyltransferase substrate binding protein, HI0074 family  34.85 
 
 
141 aa  55.8  0.0000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00856355 
 
 
-
 
NC_007514  Cag_0593  nucleotidyltransferase substrate-binding protein  34.21 
 
 
136 aa  53.9  0.0000008  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1734  nucleotidyltransferase substrate binding protein, HI0074 family  30.43 
 
 
140 aa  52.8  0.000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3352  HI0074 family nucleotidyltransferase substrate binding protein  32.82 
 
 
137 aa  52  0.000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_0490  nucleotidyltransferase substrate binding protein  30.39 
 
 
138 aa  52  0.000003  Methanospirillum hungatei JF-1  Archaea  normal  0.26398  normal 
 
 
-
 
NC_011126  HY04AAS1_1590  nucleotidyltransferase substrate binding protein, HI0074 family  35.8 
 
 
135 aa  50.8  0.000007  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1937  hypothetical protein  27.83 
 
 
133 aa  48.5  0.00003  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3007  HI0074 family nucleotidyltransferase substrate binding protein  30.56 
 
 
139 aa  48.9  0.00003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_02500  Nucleotidyltransferase substrate binding protein, HI0074  33.33 
 
 
142 aa  47.4  0.00006  Azotobacter vinelandii DJ  Bacteria  normal  0.582316  n/a   
 
 
-
 
NC_009135  MmarC5_0624  HI0074 family nucleotidyltransferase substrate binding protein  27.1 
 
 
130 aa  47.4  0.00006  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_014150  Bmur_1350  nucleotidyltransferase substrate binding protein, HI0074 family  37.14 
 
 
139 aa  47  0.00009  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0130  nucleotidyltransferase substrate binding protein, HI0074 family  28.3 
 
 
141 aa  41.6  0.003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0269  nucleotidyltransferase substrate binding protein, HI0074 family  26.79 
 
 
147 aa  40.4  0.009  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
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