Gene Rcas_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1208 
Symbol 
ID5538674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1561510 
End bp1561932 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content52% 
IMG OID640893340 
ProductHI0074 family nucleotidyltransferase substrate binding protein 
Protein accessionYP_001431323 
Protein GI156741194 
COG category 
COG ID 
TIGRFAM ID[TIGR01987] nucleotidyltransferase substrate binding protein, HI0074 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC CAGATGCACG TCTGCGGCAG CGGCTGAGTA GTTTCAGAAA AGCCTTATCG 
CGGCTGCACG AAGCAGTGAA TCTCGCCGCC GAACGTCCTC TTTCCAGGCT CGAAGAGCAA
GGGCTGATCC AGGCATTCAA GTTCACCCAC GAACTGGCGT GGAATGTACT CAAGGATTTC
CTGGAACTGC ACGGCGTGGC GCCGCTGTAC GGCTCCAAAG ATACGACTCG CGAAGCATTC
AAGCGCGGGT TGCTGGATCA GGGCGATCTG TGGATGGATA TGATTCGTGA TCGCAATCTA
ACATCGCACA CGTATAACGA AGAAACAGCG GTATTGATAA CCAGATCAGT TATACAACAC
TATTTCCCTC AATTTGTGAC ATTATCCGAC AAGATGGAAC AATTGCTCGC TGAGATGCCA
TGA
 
Protein sequence
MSAPDARLRQ RLSSFRKALS RLHEAVNLAA ERPLSRLEEQ GLIQAFKFTH ELAWNVLKDF 
LELHGVAPLY GSKDTTREAF KRGLLDQGDL WMDMIRDRNL TSHTYNEETA VLITRSVIQH
YFPQFVTLSD KMEQLLAEMP