Gene Rcas_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0094 
Symbol 
ID5537553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp116430 
End bp116843 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID640892259 
ProductHI0074 family nucleotidyltransferase substrate binding protein 
Protein accessionYP_001430249 
Protein GI156740120 
COG category 
COG ID 
TIGRFAM ID[TIGR01987] nucleotidyltransferase substrate binding protein, HI0074 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.257983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC CGGACGTGCG CTGGATTCAA CGGTTCAACC ATTTCACCAG AGCATTGCGT 
CAACTTGAAA AATTCATCGC CAAAGGGGAG TTGAACGAAC TTGAAGAACG GGGTTTAATC
CAGGCATTCG AGTATACCTT CGAGCTATCC TGGAATGTCA TCAAGGACTA CTTCGAGTTG
CAGGGCGATA CCGGCATTCT CGGCAGCCGC GACGCCTTTC GTCTGGCATT TCGGCGCGGA
TTGATCGAAC ACGGCGATGT TTGGATGAGT ATGATCAAAA GTCGCGCATT GACCAGCCAT
ACATATAATG AGGAGATAGC ACAGCAGGTT GCTTCGGCGA TTGTGAATCA ATACTACCCT
GAGTTTGTCA GACTGCACGA AACGTTGACA AAACTGAAAG GCAATGGGGC ATGA
 
Protein sequence
MTEPDVRWIQ RFNHFTRALR QLEKFIAKGE LNELEERGLI QAFEYTFELS WNVIKDYFEL 
QGDTGILGSR DAFRLAFRRG LIEHGDVWMS MIKSRALTSH TYNEEIAQQV ASAIVNQYYP
EFVRLHETLT KLKGNGA