9 homologs were found in PanDaTox collection
for query gene Franean1_3982 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3982  hypothetical protein  100 
 
 
494 aa  961    Frankia sp. EAN1pec  Bacteria  normal  normal  0.399913 
 
 
-
 
NC_009921  Franean1_2793  tetratricopeptide TPR_4  42.24 
 
 
1024 aa  50.1  0.00009  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  41.67 
 
 
404 aa  49.7  0.0001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_008609  Ppro_3330  TPR repeat-containing protein  36 
 
 
1038 aa  46.2  0.001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3707  hypothetical protein  35.45 
 
 
1020 aa  45.8  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.33203  normal  0.291068 
 
 
-
 
NC_008312  Tery_1492  glycosyl transferase family protein  26.62 
 
 
1737 aa  45.1  0.003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.315595  normal  0.552274 
 
 
-
 
NC_007355  Mbar_A0011  hypothetical protein  32.41 
 
 
1138 aa  43.5  0.01  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.41301  normal  0.0644501 
 
 
-
 
NC_008312  Tery_4723  TPR repeat-containing protein  29.46 
 
 
289 aa  43.5  0.01  Trichodesmium erythraeum IMS101  Bacteria  normal  0.939176  normal 
 
 
-
 
NC_013161  Cyan8802_1328  peptidase S1 and S6 chymotrypsin/Hap  24.44 
 
 
810 aa  43.5  0.01  Cyanothece sp. PCC 8802  Bacteria  normal  0.929548  normal  0.0143336 
 
 
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