| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3982 |
|---|
| Symbol | |
|---|
| ID | 5675726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4768615 |
|---|
| End bp | 4770099 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641242860 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001508277 |
|---|
| Protein GI | 158315769 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.399913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTA GTACCTACCT GCAGGGTCGG GACAGCGACC GGGCAGCCGG ATCTGGCGTC
CGGCTCGGAC GACCGGCTCG CCCAGGCCCG CGCGCTGCTG CGGCTCGGCC GGGTGCACCG
GATCGACGTA CCGGATGGTT TCCAGGAGAC CAGCCCGGAC GTGCTGGACG CCTTCGCGCG
CAAGGACCCC CGGCTGGCCG CCGCCTGCGA GGCGGGCCGG GCCGACCGGG CGATCACCCA
GGTGCTGGCC GGCGGGGTGG ACCTGCTCGA GCGCTACACG CACACCCTCG ACGACCAGAG
CCGGGCGCTG CTCACCGCCG CGATGGACAT CCGCCGGCTC GGGCGTTCCG GCCCGCTCCC
GGGGCGCTGC TCGAGCAGGC GGCGCCCGGC TACCTCGCTC CCGGCCAGCG GGTCGCCGGT
CCCGACTGGT TCGCCGCCGC CGTCCGGACC GCGACCGAGG AACTCCGTGG GGTCCGCGCG
CTCACCCCGG TCCGGACCGC GCCCGGCGTC GGCGAGCCGG ACGGGTACCT GCTACACGAC
TACCTGGAGC AACACGCCGA CGCGGCGCGC CGTGCGAATC CCGTACCCGC GGCCGTCTGG
GAAGCACTCA CGGCGCACGC GGCTGATCCG GACGAGCTGG CGCGGCTCGC GGTGGAGGCG
GAGTACCGAG GGCTGTACCA GTACGCGCAC CGGCTTGCGG TCGCGGCTGG GGACGACGCC
CATGCGCTGG GGATCCTGGC TGACCGGATG AGCGCCGACG GATACGCCGA GGAGGCGCTG
GTCGCCTATG AGCAGGCGGC GAGGACCGCC GGTTGGAGCC ATCCGATCGA GTACGCCGCC
GATCGCCTAG AGAAGTCGGG ACACGTCGAC GAGGCCATCG CCTGTTACCA CAGGGCAGCG
GAGATCTTCG GCAGGAGCGA GCCGCTGCGG CGGGCCGTGC ATCTGCTGGA GAGCGCGGGC
CGCCAAGATG AGGCGCTCGA CTGCCGGATG CGGGCGCTCG AGATAGCCGC GAGCGCGCCG
AGCCTACGTG CCCGAGCGGA AGAACTGCTT GCCGACGGCC GCACCGACGA GGCGCTGGGA
TTGTTCCACC GTGCGGACCA GGCAGATGGT TCGGCGAAGC TGTTCCCGCG AGGTGGCGAT
CTACTCGATC CGAGGACACT CGTCACCAAC TATCGGTGGC ATGCGCAGTC CTTCGATCTG
CAGCACTGGC AGGACGTCCG TGACGTGGCA GAGCTGCTGG ACACGGCTGG GCGAGCCGCC
GATGCGAATA GCTGGTTGCA GGGGCTGGCC GCCGCTTCGA CCACGACGCG GTCGAAGCGG
CGTCCGCTCG ACTGGTCGCG GCGGGCCGCC AGGCGGACGC CATCACGTGG CTGCGGGAAC
TGGCAGAGCG TGGCAACCGC CCGGCGCGAC GGGAAGCGGC CAAACAACTG CTCGCGGCGG
GGCCCTACCT GCCAGGATGA GGTGAGACAG GCTCGGTTCC GGTAG
|
|---|
| Protein sequence | MPTSTYLQGR DSDRAAGSGV RLGRPARPGP RAAAARPGAP DRRTGWFPGD QPGRAGRLRA
QGPPAGRRLR GGPGRPGDHP GAGRRGGPAR ALHAHPRRPE PGAAHRRDGH PPARAFRPAP
GALLEQAAPG YLAPGQRVAG PDWFAAAVRT ATEELRGVRA LTPVRTAPGV GEPDGYLLHD
YLEQHADAAR RANPVPAAVW EALTAHAADP DELARLAVEA EYRGLYQYAH RLAVAAGDDA
HALGILADRM SADGYAEEAL VAYEQAARTA GWSHPIEYAA DRLEKSGHVD EAIACYHRAA
EIFGRSEPLR RAVHLLESAG RQDEALDCRM RALEIAASAP SLRARAEELL ADGRTDEALG
LFHRADQADG SAKLFPRGGD LLDPRTLVTN YRWHAQSFDL QHWQDVRDVA ELLDTAGRAA
DANSWLQGLA AASTTTRSKR RPLDWSRRAA RRTPSRGCGN WQSVATARRD GKRPNNCSRR
GPTCQDEVRQ ARFR
|
|---|
| |