Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0011 |
Symbol | |
ID | 3627597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 10465 |
End bp | 13881 |
Gene Length | 3417 bp |
Protein Length | 1138 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637698904 |
Product | hypothetical protein |
Protein accession | YP_303584 |
Protein GI | 73667569 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.41301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0644501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAA TTAGGAAAAA TAATTTGATT GTTGGTTTTT TTATTCTCCT TGCATTGATG CTATATTTCT TTTCAGGTTT TTTATCTGTT GCAGGAGCTG TTACAGGTAA GGAGCTGGTT GCAGAAGACT ATGAGAAGAA TGAAGTTAAT GAAAAGACTG AAGTCGCTCC TGATCTTTAT GAGATAATGG CACAGCGCCC ATCTTCTATA GAAGGCTTGA TTGATAAGGG AAATGCGTTG TACTCTAGTA AAAAATATCA GCTCTCTGTA AACTGCTATA ATGATGCACT TAAGATCGAT CCTAATTCTT CATTGGCCTG GTATGGAAAA GGATGTTCTC TGGCCGAACT GGGAAAGAAT GACCAAGCAG TCAACTGTTA TGAGAAGGCT CTTTCAACCT TTCCGGTCTC TCCCGAAAAC TGGTATAATA AGGGTAACAA ACATCTTGAG CTAAATAACT ATGTTGAGGC TATCAACTTC TATGACAAAA GCTTTGCTGC AAATACCTAT CTCTCTACGG TATGGTACCG AAAAGCTCTT GCCTCTGAGC AGCTGGGGCT TGATCAGGAA TCTCTGAACT CTTATGATAA ATCTATTGAA CTGAATTCCA ATTCTTCCAG CTCTCTGCAG ATGCAGGGAA TGGCTTACCT CGGACTTGAG AAGTATCCTG AGGCAATTGA ATACCTTGAC AGCGCTCTTA ATATTACTCC TGACAATGCT GAACTCTTGT ATCAGAAAGG AGTAGTTCTT GATAAATCCG GTGATTACGA AACTGCAATA GACTGTTATG ACAAAGCAAT TTCTTTTAAT CCAGATCTGG TAAATGCCTG GCATAATAAA GGTGTTAACC TTGAAAAGAT GGGAATTTAT GATGAGGCGC TTACTTGCTA CGAGTTTGTT CTTCTGTCCG AGCCTGAAAA TCTTGATGTT TTACAGAGAA AAGGTGTATG CCTTGAAAAG CTTGGAAGAA ATGATGAAGC TCTTCAGTGC TATGACGAGG TTCTGGTCTA CGATCCTGGC AGTTCCGAAG CCTGGTATAG TAAAGGTTCT CTGCTTAATA AGACCGGCCA ATATGACGCT GCAATAGCGT GCTATGATAA GGCGCTTAAC CCGGACACAG GGGTTCAGGT TGAGGAAATC GGAAGTGATT CGCTCGAACA ACTAAATGTT TACGAAGCTG CACTTCCATC TTATCCCGAA AATCCTGAAT TTAAGTCGTC ACCTACAGTT AAAATCTGGT ACGAGAAAGC CCTAGCTTTT GATAAGCTTG AAAAATACGA ATCTGCGATT GAGTGTTATG ATAAGGTTCT TGAAACAGAG TCTGGACATG CTGTTGTCTG GTATCTAAAA GGCCTGGATC TTGAAAGGCT TGGCAGGTAC GAAGAGGCAA TTGAATGCTA TGGCCGAGCC CTGAAACTGG ACTCCGGGTA TGCTAAAGTC TGGTATCGGA AAGGCTTAGA CTCTTCAAAA ATCAAAGACT ACAAAGATGC AGTAGAAAGC TATGATAAAG CTCTCGAGAT TGATGAAAAC TATACCCTTA CCTGGGCTGG CAAGGCTTTT GCCCTGGCGA AACTTGGAGA ATACGAAAGT TCGCTCACAT GTTACAACAA AGTCCTTGGG GCTGTGCCCA GCAGCGCAGT TGCCTGGTAC AATAAAGGGC TTGTTCTTGA TGAACTCGGA AAGCATGCAG AAGCTTCTGA ATGTTATAAC CAGACTCTTC TGATCGATCC CGAATATTCG GCTGCGCGCT TTAAGTTGAA CAAAAACATG AAACAGGACT CAACAGAAGC TCTAATATCA GAGCATGTTA AAAACAATAG TGCAGATGCC AATCCTGCCC AGATGCTTTC TGGAGGTTTC TGGGCATATC TTCTGAACTA TGAATACGCA AGCTCAGAAG ACCGCGATGA GCCTTCCGAA GATCTGAACC TGTTTAGCCC CGATATCAGT TACGATGCCG CATGGTATGG AAAGGCCTCA ATCTACGGTA AACTCGGAAT GTACGACGAT GCACTTAATT CTTATGATAT GGTGCTTGCA ATTAATCCTG CACGTGCTGA GGCCTGGTAT GAAAAAGGCT CGATACTTGA TAGGTTAGAC AGAAGTGAGG AAGCTCTGGA ATGCTACAGG AAAGCCCTGG ACCTTGATCC ACAGTCAAGT ACAGCTCTGT ATGGGATAGC CTCTACTACA GGTGATCTTG GAAAGCTTGA AGAAGCAGTC AGTTACTATG ACCAGTTGCT TACTCTAAAC TCCAGTAACT CAGATGCCCT CCTTGGGAAA GGTCTTGCTC TCTCGAATCT GAGCAGGTAT GACGAGGCAA TTTCCTGTTA CACTAAACTT CTTAACTCTG AGCCTGAAAA CCTTGAGGCG CTCAGAAGTC GGGCTTTTGC TCTCTCGAAA TCCAATAAAT CCAATGACGC GCTGGCAGAT TACGATAGAA TAATTAAGCT TCAGCCTGAA AATTCCCAGA TCCTGGCTGA GAAAGCCTCT TTACTTGAGG CACTTGGCAG GTATGAGGAA ACTGCTGCAT GTTATGAGAG AATGCTTGAA ATCTCACCGA ACAACAGGGA GATAATTTAC AAACAAGGAA AAGCTCTGGA GAACAGCGGA GACTTTGAGG GAGCAGTGGG CTGTTACGAT AGAATTCTTG AGCTGGATCC GGGCAATGTG GGTGCTTACA ATAACAAAGG CTTTGTGCTC TACAAGCTGG AAAAATATCA GCAAGCTATT GACTGTTACG ATAAGGCTCT GGAATACAGT CCAGACAATG TTACAGCCTG GTATTTCCAG GGCTGTACTT ATCTCACGTT AAGCAGCAAT AAAGCAGCCC TTAATTGTTT CAACAAAACA GTACAGCTTA AACCTGATTG TATCACAGCA TGGTATAACA AAGGATACAT TCATAACATG ATGGGAGAAA CTGAAGAAGC AGTTTCATGC TATGATAATG TCCTTGCAAT TAGTCCGAAC TCACCTTCGG CTCTTTACAA TAAACGGTTT GCGCTTTATA CTCTAAAGAA ACTAGATGAG GCTGCTGCAT GCAAGGCAAA ACTAGATGAG ATAGATCCAG GTTTTGTGGA CGCTCTGCAG GAAAGAGGAA CTAAGTTCTT CCTTCCTGAA TATTATAATA GCACTCTGAA TTATTCCCTG CCTTCAAGAT GGTACGGAGG AGAAGAAAAT GTCTCAGGAA ATGTAAGTAC AAACACGACT GCACCTTTAT TAGGAAAGAT AACTGAATCC TCCGACAGCC CGGAAAATAA CAGCAGCAAT TATAATACTA CGGAGCTTAA TGATGGACAG GAAAGCGAGG ATCCTACTGA GCTTGAGTAT GGGCAGGAAA GTGAATATTC GGAGCTTGAT GATGAGCAGG AAAGTGAGGA TCCAGATTAT TGGTATGTTC CCGAGCCTGA TGGGTGA
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Protein sequence | MSSIRKNNLI VGFFILLALM LYFFSGFLSV AGAVTGKELV AEDYEKNEVN EKTEVAPDLY EIMAQRPSSI EGLIDKGNAL YSSKKYQLSV NCYNDALKID PNSSLAWYGK GCSLAELGKN DQAVNCYEKA LSTFPVSPEN WYNKGNKHLE LNNYVEAINF YDKSFAANTY LSTVWYRKAL ASEQLGLDQE SLNSYDKSIE LNSNSSSSLQ MQGMAYLGLE KYPEAIEYLD SALNITPDNA ELLYQKGVVL DKSGDYETAI DCYDKAISFN PDLVNAWHNK GVNLEKMGIY DEALTCYEFV LLSEPENLDV LQRKGVCLEK LGRNDEALQC YDEVLVYDPG SSEAWYSKGS LLNKTGQYDA AIACYDKALN PDTGVQVEEI GSDSLEQLNV YEAALPSYPE NPEFKSSPTV KIWYEKALAF DKLEKYESAI ECYDKVLETE SGHAVVWYLK GLDLERLGRY EEAIECYGRA LKLDSGYAKV WYRKGLDSSK IKDYKDAVES YDKALEIDEN YTLTWAGKAF ALAKLGEYES SLTCYNKVLG AVPSSAVAWY NKGLVLDELG KHAEASECYN QTLLIDPEYS AARFKLNKNM KQDSTEALIS EHVKNNSADA NPAQMLSGGF WAYLLNYEYA SSEDRDEPSE DLNLFSPDIS YDAAWYGKAS IYGKLGMYDD ALNSYDMVLA INPARAEAWY EKGSILDRLD RSEEALECYR KALDLDPQSS TALYGIASTT GDLGKLEEAV SYYDQLLTLN SSNSDALLGK GLALSNLSRY DEAISCYTKL LNSEPENLEA LRSRAFALSK SNKSNDALAD YDRIIKLQPE NSQILAEKAS LLEALGRYEE TAACYERMLE ISPNNREIIY KQGKALENSG DFEGAVGCYD RILELDPGNV GAYNNKGFVL YKLEKYQQAI DCYDKALEYS PDNVTAWYFQ GCTYLTLSSN KAALNCFNKT VQLKPDCITA WYNKGYIHNM MGETEEAVSC YDNVLAISPN SPSALYNKRF ALYTLKKLDE AAACKAKLDE IDPGFVDALQ ERGTKFFLPE YYNSTLNYSL PSRWYGGEEN VSGNVSTNTT APLLGKITES SDSPENNSSN YNTTELNDGQ ESEDPTELEY GQESEYSELD DEQESEDPDY WYVPEPDG
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