Gene Mbar_A0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0011 
Symbol 
ID3627597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp10465 
End bp13881 
Gene Length3417 bp 
Protein Length1138 aa 
Translation table11 
GC content43% 
IMG OID637698904 
Producthypothetical protein 
Protein accessionYP_303584 
Protein GI73667569 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.41301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0644501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCAA TTAGGAAAAA TAATTTGATT GTTGGTTTTT TTATTCTCCT TGCATTGATG 
CTATATTTCT TTTCAGGTTT TTTATCTGTT GCAGGAGCTG TTACAGGTAA GGAGCTGGTT
GCAGAAGACT ATGAGAAGAA TGAAGTTAAT GAAAAGACTG AAGTCGCTCC TGATCTTTAT
GAGATAATGG CACAGCGCCC ATCTTCTATA GAAGGCTTGA TTGATAAGGG AAATGCGTTG
TACTCTAGTA AAAAATATCA GCTCTCTGTA AACTGCTATA ATGATGCACT TAAGATCGAT
CCTAATTCTT CATTGGCCTG GTATGGAAAA GGATGTTCTC TGGCCGAACT GGGAAAGAAT
GACCAAGCAG TCAACTGTTA TGAGAAGGCT CTTTCAACCT TTCCGGTCTC TCCCGAAAAC
TGGTATAATA AGGGTAACAA ACATCTTGAG CTAAATAACT ATGTTGAGGC TATCAACTTC
TATGACAAAA GCTTTGCTGC AAATACCTAT CTCTCTACGG TATGGTACCG AAAAGCTCTT
GCCTCTGAGC AGCTGGGGCT TGATCAGGAA TCTCTGAACT CTTATGATAA ATCTATTGAA
CTGAATTCCA ATTCTTCCAG CTCTCTGCAG ATGCAGGGAA TGGCTTACCT CGGACTTGAG
AAGTATCCTG AGGCAATTGA ATACCTTGAC AGCGCTCTTA ATATTACTCC TGACAATGCT
GAACTCTTGT ATCAGAAAGG AGTAGTTCTT GATAAATCCG GTGATTACGA AACTGCAATA
GACTGTTATG ACAAAGCAAT TTCTTTTAAT CCAGATCTGG TAAATGCCTG GCATAATAAA
GGTGTTAACC TTGAAAAGAT GGGAATTTAT GATGAGGCGC TTACTTGCTA CGAGTTTGTT
CTTCTGTCCG AGCCTGAAAA TCTTGATGTT TTACAGAGAA AAGGTGTATG CCTTGAAAAG
CTTGGAAGAA ATGATGAAGC TCTTCAGTGC TATGACGAGG TTCTGGTCTA CGATCCTGGC
AGTTCCGAAG CCTGGTATAG TAAAGGTTCT CTGCTTAATA AGACCGGCCA ATATGACGCT
GCAATAGCGT GCTATGATAA GGCGCTTAAC CCGGACACAG GGGTTCAGGT TGAGGAAATC
GGAAGTGATT CGCTCGAACA ACTAAATGTT TACGAAGCTG CACTTCCATC TTATCCCGAA
AATCCTGAAT TTAAGTCGTC ACCTACAGTT AAAATCTGGT ACGAGAAAGC CCTAGCTTTT
GATAAGCTTG AAAAATACGA ATCTGCGATT GAGTGTTATG ATAAGGTTCT TGAAACAGAG
TCTGGACATG CTGTTGTCTG GTATCTAAAA GGCCTGGATC TTGAAAGGCT TGGCAGGTAC
GAAGAGGCAA TTGAATGCTA TGGCCGAGCC CTGAAACTGG ACTCCGGGTA TGCTAAAGTC
TGGTATCGGA AAGGCTTAGA CTCTTCAAAA ATCAAAGACT ACAAAGATGC AGTAGAAAGC
TATGATAAAG CTCTCGAGAT TGATGAAAAC TATACCCTTA CCTGGGCTGG CAAGGCTTTT
GCCCTGGCGA AACTTGGAGA ATACGAAAGT TCGCTCACAT GTTACAACAA AGTCCTTGGG
GCTGTGCCCA GCAGCGCAGT TGCCTGGTAC AATAAAGGGC TTGTTCTTGA TGAACTCGGA
AAGCATGCAG AAGCTTCTGA ATGTTATAAC CAGACTCTTC TGATCGATCC CGAATATTCG
GCTGCGCGCT TTAAGTTGAA CAAAAACATG AAACAGGACT CAACAGAAGC TCTAATATCA
GAGCATGTTA AAAACAATAG TGCAGATGCC AATCCTGCCC AGATGCTTTC TGGAGGTTTC
TGGGCATATC TTCTGAACTA TGAATACGCA AGCTCAGAAG ACCGCGATGA GCCTTCCGAA
GATCTGAACC TGTTTAGCCC CGATATCAGT TACGATGCCG CATGGTATGG AAAGGCCTCA
ATCTACGGTA AACTCGGAAT GTACGACGAT GCACTTAATT CTTATGATAT GGTGCTTGCA
ATTAATCCTG CACGTGCTGA GGCCTGGTAT GAAAAAGGCT CGATACTTGA TAGGTTAGAC
AGAAGTGAGG AAGCTCTGGA ATGCTACAGG AAAGCCCTGG ACCTTGATCC ACAGTCAAGT
ACAGCTCTGT ATGGGATAGC CTCTACTACA GGTGATCTTG GAAAGCTTGA AGAAGCAGTC
AGTTACTATG ACCAGTTGCT TACTCTAAAC TCCAGTAACT CAGATGCCCT CCTTGGGAAA
GGTCTTGCTC TCTCGAATCT GAGCAGGTAT GACGAGGCAA TTTCCTGTTA CACTAAACTT
CTTAACTCTG AGCCTGAAAA CCTTGAGGCG CTCAGAAGTC GGGCTTTTGC TCTCTCGAAA
TCCAATAAAT CCAATGACGC GCTGGCAGAT TACGATAGAA TAATTAAGCT TCAGCCTGAA
AATTCCCAGA TCCTGGCTGA GAAAGCCTCT TTACTTGAGG CACTTGGCAG GTATGAGGAA
ACTGCTGCAT GTTATGAGAG AATGCTTGAA ATCTCACCGA ACAACAGGGA GATAATTTAC
AAACAAGGAA AAGCTCTGGA GAACAGCGGA GACTTTGAGG GAGCAGTGGG CTGTTACGAT
AGAATTCTTG AGCTGGATCC GGGCAATGTG GGTGCTTACA ATAACAAAGG CTTTGTGCTC
TACAAGCTGG AAAAATATCA GCAAGCTATT GACTGTTACG ATAAGGCTCT GGAATACAGT
CCAGACAATG TTACAGCCTG GTATTTCCAG GGCTGTACTT ATCTCACGTT AAGCAGCAAT
AAAGCAGCCC TTAATTGTTT CAACAAAACA GTACAGCTTA AACCTGATTG TATCACAGCA
TGGTATAACA AAGGATACAT TCATAACATG ATGGGAGAAA CTGAAGAAGC AGTTTCATGC
TATGATAATG TCCTTGCAAT TAGTCCGAAC TCACCTTCGG CTCTTTACAA TAAACGGTTT
GCGCTTTATA CTCTAAAGAA ACTAGATGAG GCTGCTGCAT GCAAGGCAAA ACTAGATGAG
ATAGATCCAG GTTTTGTGGA CGCTCTGCAG GAAAGAGGAA CTAAGTTCTT CCTTCCTGAA
TATTATAATA GCACTCTGAA TTATTCCCTG CCTTCAAGAT GGTACGGAGG AGAAGAAAAT
GTCTCAGGAA ATGTAAGTAC AAACACGACT GCACCTTTAT TAGGAAAGAT AACTGAATCC
TCCGACAGCC CGGAAAATAA CAGCAGCAAT TATAATACTA CGGAGCTTAA TGATGGACAG
GAAAGCGAGG ATCCTACTGA GCTTGAGTAT GGGCAGGAAA GTGAATATTC GGAGCTTGAT
GATGAGCAGG AAAGTGAGGA TCCAGATTAT TGGTATGTTC CCGAGCCTGA TGGGTGA
 
Protein sequence
MSSIRKNNLI VGFFILLALM LYFFSGFLSV AGAVTGKELV AEDYEKNEVN EKTEVAPDLY 
EIMAQRPSSI EGLIDKGNAL YSSKKYQLSV NCYNDALKID PNSSLAWYGK GCSLAELGKN
DQAVNCYEKA LSTFPVSPEN WYNKGNKHLE LNNYVEAINF YDKSFAANTY LSTVWYRKAL
ASEQLGLDQE SLNSYDKSIE LNSNSSSSLQ MQGMAYLGLE KYPEAIEYLD SALNITPDNA
ELLYQKGVVL DKSGDYETAI DCYDKAISFN PDLVNAWHNK GVNLEKMGIY DEALTCYEFV
LLSEPENLDV LQRKGVCLEK LGRNDEALQC YDEVLVYDPG SSEAWYSKGS LLNKTGQYDA
AIACYDKALN PDTGVQVEEI GSDSLEQLNV YEAALPSYPE NPEFKSSPTV KIWYEKALAF
DKLEKYESAI ECYDKVLETE SGHAVVWYLK GLDLERLGRY EEAIECYGRA LKLDSGYAKV
WYRKGLDSSK IKDYKDAVES YDKALEIDEN YTLTWAGKAF ALAKLGEYES SLTCYNKVLG
AVPSSAVAWY NKGLVLDELG KHAEASECYN QTLLIDPEYS AARFKLNKNM KQDSTEALIS
EHVKNNSADA NPAQMLSGGF WAYLLNYEYA SSEDRDEPSE DLNLFSPDIS YDAAWYGKAS
IYGKLGMYDD ALNSYDMVLA INPARAEAWY EKGSILDRLD RSEEALECYR KALDLDPQSS
TALYGIASTT GDLGKLEEAV SYYDQLLTLN SSNSDALLGK GLALSNLSRY DEAISCYTKL
LNSEPENLEA LRSRAFALSK SNKSNDALAD YDRIIKLQPE NSQILAEKAS LLEALGRYEE
TAACYERMLE ISPNNREIIY KQGKALENSG DFEGAVGCYD RILELDPGNV GAYNNKGFVL
YKLEKYQQAI DCYDKALEYS PDNVTAWYFQ GCTYLTLSSN KAALNCFNKT VQLKPDCITA
WYNKGYIHNM MGETEEAVSC YDNVLAISPN SPSALYNKRF ALYTLKKLDE AAACKAKLDE
IDPGFVDALQ ERGTKFFLPE YYNSTLNYSL PSRWYGGEEN VSGNVSTNTT APLLGKITES
SDSPENNSSN YNTTELNDGQ ESEDPTELEY GQESEYSELD DEQESEDPDY WYVPEPDG