17 homologs were found in PanDaTox collection
for query gene Franean1_3923 on replicon NC_009921
Organism: Frankia sp. EAN1pec



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_3923  hypothetical protein  100 
 
 		 370 aa  766    Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00983972  normal  0.0399777 
 
 
-
 
NC_009921  Franean1_3676  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  56.93 
 
 		 443 aa  459  9.999999999999999e-129  Frankia sp. EAN1pec  Bacteria  normal  0.36982  normal  1 
 
 
-
 
NC_009921  Franean1_3450  hypothetical protein  69.05 
 
 		 63 aa  67.4  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  0.785498  normal  1 
 
 
-
 
NC_009921  Franean1_1952  hypothetical protein  25.79 
 
 		 442 aa  66.2  0.0000000008  Frankia sp. EAN1pec  Bacteria  normal  0.780394  normal  0.542159 
 
 
-
 
NC_009921  Franean1_6824  hypothetical protein  22.1 
 
 		 401 aa  55.8  0.000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.759789 
 
 
-
 
NC_009921  Franean1_5667  putative Leu/Ile/Val/Thr-binding protein precursor; putative signal peptide  26.26 
 
 		 447 aa  55.5  0.000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3442  ABC-type branched-chain amino acid transport systems periplasmic component-like  22.75 
 
 		 425 aa  51.6  0.00002  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_3347  amino acid/amide ABC transporter substrate- binding protein, HAAT family  26.56 
 
 		 466 aa  51.2  0.00003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.716666  normal  0.862215 
 
 
-
 
NC_009921  Franean1_3119  putative Leu/Ile/Val-binding lipoprotein transmembrane  22.33 
 
 		 399 aa  48.9  0.0001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3169  putative Leu/Ile/Val-binding lipoprotein transmembrane  23.34 
 
 		 402 aa  48.1  0.0002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2791  Extracellular ligand-binding receptor  31.43 
 
 		 436 aa  47.4  0.0004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.55279  normal  0.125183 
 
 
-
 
NC_009921  Franean1_3245  putative branched-chain amino acid ABC transport system, solute-binding protein  22.55 
 
 		 399 aa  45.4  0.001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_5580  hypothetical protein  19.73 
 
 		 454 aa  45.1  0.002  Frankia sp. EAN1pec  Bacteria  normal  0.647703  normal  1 
 
 
-
 
NC_009921  Franean1_7028  hypothetical protein  22.19 
 
 		 419 aa  44.3  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.557944  normal  1 
 
 
-
 
NC_008390  Bamb_1595  extracellular ligand-binding receptor  23.43 
 
 		 411 aa  43.5  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  0.523513  n/a   
 
 
-
 
NC_009921  Franean1_4735  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  23.15 
 
 		 450 aa  43.1  0.008  Frankia sp. EAN1pec  Bacteria  normal  0.96581  normal  1 
 
 
-
 
NC_009921  Franean1_0555  hypothetical protein  21.46 
 
 		 406 aa  42.7  0.01  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>