| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5580 |
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| Symbol | |
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| ID | 5673908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6760126 |
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| End bp | 6761490 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244434 |
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| Product | hypothetical protein |
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| Protein accession | YP_001509838 |
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| Protein GI | 158317330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.647703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCATCT CACCGGTTAC GGAGGCGGCA GGCGGATTGT CCGCCGCCGT CCGCCGCCGG
CGCACACGGC GCCGGCCTCA CCTGGCGAGC CGTCAACGGA CGCGCCTGTT CACGCGCCTG
CGGACTCGCC TCCGGACCCT GCCGATCGTG CTCGCGGCGC TGCTCGTGGC CGCCGGGTGT
GTCTCGTGCG TGTCCTGGAA CGACTCGTCC GATGCCACGG ACTCGCACGG TTCGGGTGCC
TCGTGCCCGC CCGTGCCGGG GGTCACGGCG GACGAGGTCC GGCTCGGCCT GCTGTTCCCG
AACACCGGCA ACGCGGCGTC GTTGTTCGAC CCGTTCCGGG CCGGGGTCGA CGCCCGGCTC
GGGGTGGCGA ACGCGGCCGG TGGGGTCCAG GGGCGGAGCA TCGAGTACTC GTGGCGCGAC
GACGAATCGC AGCCCAGCGT CAACGAGACC GCGGCCCGCA TGCTCGTCGA CCAGCACCAG
GTGTTCGGGA TCGTCGAGTC CACCACGGCC GCGGCCGGCT CGGCGGAGTT CCTGCACAGC
CGCGGCATCC CGGTCACCGG AACGTCGCTG GAGGCGTCCT GGACCACCTT CGACAACATG
TTCAGCTACT CGAACATGAT CGCGGACGGT GCCTCGGTGT CGACCTGGGG TGACTTCGTC
GCCGAGCGCG GGGGGACGAC GGCGCTGATC GCCGCGTCGA GCTTCTCGGC CGCCTCGGGC
GCCTTCGGCG AGGAGCTGGC CGCCAGCCTG GAGGCGGCCG GGGTGCGGGT CGTCGGCACC
CTCGACGCGA CCGGGCCGAT CGACTTCGCC GACGTCGGCG CGCAGGTGCG TGACAGCGGC
GCCGACACGC TCGTCGGGGC GGTCACGGGG GCCGCGTTCG GCCAGGTCGT GCTGGGCGCC
CGGGGGGCCG GGGCCAACCT GCGGGTGATC CTCTCGCCGT CCGGGTACGA CCAGAGCCTG
CTGGACGTCT TCGGCCGGGT GCTGAGCGGC GTCTACATCT TCGTCGACTA CCAGCCGTTC
GAGCTCGACA CGCCGGGCCA CCGCGCCTTC CTCGACGCGA TGACGCGGTA CGCCCCGTAC
CTGCAGTCGC CGAACAGGCA GGCCGCGCTC TCCGGCTGGA TCTCGACCGA CATGTTCCTG
CGCGGGCTGG CCGAGGCCGG CCGGTGCCCG ACCCGGGAGC GCTTCATCGA GGGGCTGCGC
GCCGTCCGCG ACTACGCCGC CGACGGGCTG CTGCCGGCGC CCATCGACTT CACGGCCTCC
TTCGGTCAGC TCGGCCGGTG CTACACCTTC CTTCAGGTGG CTCCCGACGC GAGCCGCTTC
GACGTGCTCC GGCCGGCACC GCGCTGCGGC CGGCTCGAGC ACTGA
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| Protein sequence | MRISPVTEAA GGLSAAVRRR RTRRRPHLAS RQRTRLFTRL RTRLRTLPIV LAALLVAAGC
VSCVSWNDSS DATDSHGSGA SCPPVPGVTA DEVRLGLLFP NTGNAASLFD PFRAGVDARL
GVANAAGGVQ GRSIEYSWRD DESQPSVNET AARMLVDQHQ VFGIVESTTA AAGSAEFLHS
RGIPVTGTSL EASWTTFDNM FSYSNMIADG ASVSTWGDFV AERGGTTALI AASSFSAASG
AFGEELAASL EAAGVRVVGT LDATGPIDFA DVGAQVRDSG ADTLVGAVTG AAFGQVVLGA
RGAGANLRVI LSPSGYDQSL LDVFGRVLSG VYIFVDYQPF ELDTPGHRAF LDAMTRYAPY
LQSPNRQAAL SGWISTDMFL RGLAEAGRCP TRERFIEGLR AVRDYAADGL LPAPIDFTAS
FGQLGRCYTF LQVAPDASRF DVLRPAPRCG RLEH
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