14 homologs were found in PanDaTox collection
for query gene Francci3_0932 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_0932  hypothetical protein  100 
 
 
355 aa  687    Frankia sp. CcI3  Bacteria  normal  0.141741  normal 
 
 
-
 
NC_013235  Namu_0804  hypothetical protein  31.49 
 
 
318 aa  97.4  3e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0561  hypothetical protein  28.86 
 
 
320 aa  73.6  0.000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.273722  normal 
 
 
-
 
NC_013530  Xcel_2602  hypothetical protein  25.96 
 
 
322 aa  67.8  0.0000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.419113  n/a   
 
 
-
 
NC_013441  Gbro_3709  hypothetical protein  23.59 
 
 
312 aa  59.7  0.00000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1506  hypothetical protein  27.78 
 
 
306 aa  57.4  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.167078 
 
 
-
 
NC_008699  Noca_4255  hypothetical protein  26.85 
 
 
320 aa  52.8  0.00001  Nocardioides sp. JS614  Bacteria  normal  0.0144087  n/a   
 
 
-
 
NC_008699  Noca_0898  hypothetical protein  28.64 
 
 
308 aa  51.2  0.00003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_5265  hypothetical protein  28.66 
 
 
286 aa  48.1  0.0002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.550058 
 
 
-
 
NC_013159  Svir_05730  hypothetical protein  29.1 
 
 
297 aa  48.1  0.0002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0865  hypothetical protein  28.34 
 
 
319 aa  47.8  0.0003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0633151  normal  0.194369 
 
 
-
 
NC_007777  Francci3_3007  hypothetical protein  39.34 
 
 
424 aa  45.1  0.002  Frankia sp. CcI3  Bacteria  normal  0.153123  normal  0.294126 
 
 
-
 
NC_008699  Noca_0019  hypothetical protein  25.91 
 
 
313 aa  45.1  0.002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0497  hypothetical protein  26.94 
 
 
285 aa  45.1  0.002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
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