8 homologs were found in PanDaTox collection
for query gene EcSMS35_A0095 on replicon NC_010488
Organism: Escherichia coli SMS-3-5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010488  EcSMS35_A0095  repFIB replication protein A  100 
 
 		 325 aa  665    Escherichia coli SMS-3-5  Bacteria  normal  0.0621039  hitchhiker  0.000000000993191 
 
 
-
 
NC_011350  ECH74115_B0026  initiator RepB protein  99.08 
 
 		 325 aa  658    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010158  YpAngola_0045  replication initiation protein  66.91 
 
 		 354 aa  395  1e-109  Yersinia pestis Angola  Bacteria  hitchhiker  3.9744499999999995e-86  normal  1 
 
 
-
 
NC_011092  SeSA_B0008  DNA replication protein  57.73 
 
 		 336 aa  356  2.9999999999999997e-97  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.223189  normal  1 
 
 
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NC_009425  Ent638_4249  initiator RepB protein  42.49 
 
 		 286 aa  227  3e-58  Enterobacter sp. 638  Bacteria  normal  1  normal  0.0202153 
 
 
-
 
NC_004349  SO_A0001  replication protein RepA  35.51 
 
 		 293 aa  171  2e-41  Shewanella oneidensis MR-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2499  hypothetical protein  26 
 
 		 293 aa  53.5  0.000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008758  Pnap_4470  TrfA  24.21 
 
 		 337 aa  49.3  0.00009  Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00253708  hitchhiker  4.02006e-19 
 
 
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