| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0001 |
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| Symbol | repA |
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| ID | 1172597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 608 |
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| End bp | 1489 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637346463 |
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| Product | replication protein RepA |
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| Protein accession | NP_720340 |
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| Protein GI | 24376232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGAT CAGAAAACGC ATTATTACCC ATACCGGTTA CCGAAAACCT CAACAGCGGT
AAACTCCTAA CGATTAGCAG CACAACCAGT GTGCAGCCTA ATGTTCTCCT CAGGACAGGT
GTATTTACGC CCGTAGGCCG CAGAACGAAT GCCAATGATG TCAAAGCGCA AGATCTCAGT
AATGATCTGG TTAACCTCGA TGTTTGCCAA AAGGAAGGCT ATGACCTCGT TACCGTCAGG
GGCCAACGGC TGAATATCGA AACCGATTTT AAGGTGTGGT GCGGTATTGT ACTGGTTTTT
AGTAAGTACG GATATTCATC CAACACAGTA AAACTAACGT TTTCAGAGTT CGCGAAGTTT
TGCAGTTATC CCAGCCGACG TTTTGATAAA AACCTGCGTA AACAGATCGG TGATTCACTC
GGGCGCATCC AAAGCCAAAG TTTGTCATTC AGGCGCAAAA ATTCCGAAAA GGCCGTGCAT
ACGGGGATGC TGTTGCGGGC CATGTATGAC GGTGAAGAAG ATATTGTTGA GCTAATGGCC
GATGAAACCC TGTGGGATCT GTATCGGTTA GACTATCAGG TGTTAGTTAG TCTGCGAGTA
TTGGAAAAAT TGCCCCGTGC AGAGGTCGCA CAGTGCCTGT ATTTGTATTT CACCTCTTTA
CCCGAGAATC CTCACCCCGT TTCATTTGAG CGCCTTAGAG AGCGTTTGAG GCTTGAGACG
TCCAAAAAAG AAGCAAATCG GAAGATTAAG ACTGGTATTC AGAAGTTGGA ATCGATTGGC
TACCTGTCTG GCAGCTTCGC AGTTAAGAAC GGTGAGCAAT ACTATTTGAT TGATCAGCGT
TATAAGAAAC TGGAAGCCGC CATTACTGGC TCACTGTTTT GA
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| Protein sequence | MDRSENALLP IPVTENLNSG KLLTISSTTS VQPNVLLRTG VFTPVGRRTN ANDVKAQDLS
NDLVNLDVCQ KEGYDLVTVR GQRLNIETDF KVWCGIVLVF SKYGYSSNTV KLTFSEFAKF
CSYPSRRFDK NLRKQIGDSL GRIQSQSLSF RRKNSEKAVH TGMLLRAMYD GEEDIVELMA
DETLWDLYRL DYQVLVSLRV LEKLPRAEVA QCLYLYFTSL PENPHPVSFE RLRERLRLET
SKKEANRKIK TGIQKLESIG YLSGSFAVKN GEQYYLIDQR YKKLEAAITG SLF
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