| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4470 |
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| Symbol | |
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| ID | 4685622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | - |
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| Start bp | 31163 |
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| End bp | 32176 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639826323 |
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| Product | TrfA |
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| Protein accession | YP_973488 |
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| Protein GI | 121583047 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00253708 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 4.02006e-19 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCA GCCAAACATC TTTCGTAAAG CTAAACTTCG ATAACATCGA GTTGCTTCTT
GATTCTAAAG ACTCAAGTGG GTCTGCTGCT AAGCAGTCTG AATCGGTTTC GAATGCAGCG
GCCAAGCCTA AGAGCCCTGG ACGCACTCGC CAGCCAAATG CAGCTAGTTC AATGGAAGTG
CTCAAAAGGA AGACTACTGA AGCCTTAATG AGGCAGCGCA GCGTCATCGA TGCGAGGATG
CTGCAAACTG TGTTGCCGAT GTGGGATGAC GATAACCGGG GAGTTCCAAA CCCTTTGATC
AGATCCGGCC TTTTCAGTGT TAGGAACACA GAAAAGCGTG AGTATTTGCC AAAACTGCAT
ATTGCTTCCT TGTCAAATTA CAACGTTTCT TATACAGGTC AAGATCTGCA ACAGGATGAT
CTAACGGTTT GGATGTCGTT GATAAACTTA GCCAGAAATC AGCCTATGTC AGACTCAGTG
TTATTCACTG GCTACCAGCT AATAAAAGAT ATGGGCTGGC GTATGCACTC CGATTCATAC
AGGCGCGCTA AGCAGTCAAT AGAACGTCTA AAAGTGACCG GGATAGAAAT CAGCACTAAC
AATAGTGAAT CGGCGTACAG CGGATCGTTA ATTCGTGAAT ATGCATGGAC AGCATCTGAT
GATAAAGGCA ATGCGCGGTG GATGGTTCGA TTCGAGCCTA CAGTGTCGAT GCTGTTCATG
GAAGACACCA CCACACTTTT GGAATGGGAG ACTCGTAAAA GCATTGGAAC TCGCGCAACC
CTCGCGCTAT TTCTTCATTC ATTTTATTCT TCACACAGAG ATCCAATTCC ATTCAAGGTC
GAAAAGCTCT ATGAGTTGTG CAGGTCAGGT GACTCTTTGA GTAGTTTCCG ACGAAATATC
AAGAACGCAC TTACCAAGCT GGTCGATGTC GGTTTCTTGA CCATGTTTGT TGTCAAAGAT
GACACGGTTC ATGTGCAGAA AAAGCTAAAA CCAAAGCTCA TACGGGCAAA ATAG
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| Protein sequence | MSTSQTSFVK LNFDNIELLL DSKDSSGSAA KQSESVSNAA AKPKSPGRTR QPNAASSMEV
LKRKTTEALM RQRSVIDARM LQTVLPMWDD DNRGVPNPLI RSGLFSVRNT EKREYLPKLH
IASLSNYNVS YTGQDLQQDD LTVWMSLINL ARNQPMSDSV LFTGYQLIKD MGWRMHSDSY
RRAKQSIERL KVTGIEISTN NSESAYSGSL IREYAWTASD DKGNARWMVR FEPTVSMLFM
EDTTTLLEWE TRKSIGTRAT LALFLHSFYS SHRDPIPFKV EKLYELCRSG DSLSSFRRNI
KNALTKLVDV GFLTMFVVKD DTVHVQKKLK PKLIRAK
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