6 homologs were found in PanDaTox collection
for query gene SO_A0001 on replicon NC_004349
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004349  SO_A0001  replication protein RepA  100 
 
 		 293 aa  602  1.0000000000000001e-171  Shewanella oneidensis MR-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009425  Ent638_4249  initiator RepB protein  43.46 
 
 		 286 aa  228  1e-58  Enterobacter sp. 638  Bacteria  normal  1  normal  0.0202153 
 
 
-
 
NC_011092  SeSA_B0008  DNA replication protein  38.87 
 
 		 336 aa  199  5e-50  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.223189  normal  1 
 
 
-
 
NC_010158  YpAngola_0045  replication initiation protein  34.58 
 
 		 354 aa  186  4e-46  Yersinia pestis Angola  Bacteria  hitchhiker  3.9744499999999995e-86  normal  1 
 
 
-
 
NC_010488  EcSMS35_A0095  repFIB replication protein A  35.51 
 
 		 325 aa  184  2.0000000000000003e-45  Escherichia coli SMS-3-5  Bacteria  normal  0.0621039  hitchhiker  0.000000000993191 
 
 
-
 
NC_011350  ECH74115_B0026  initiator RepB protein  35.87 
 
 		 325 aa  183  3e-45  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
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