10 homologs were found in PanDaTox collection
for query gene EcSMS35_0259 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_0259  lateral flagellar associated protein LafV  100 
 
 
309 aa  630  1e-179  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3375  hypothetical protein  87.38 
 
 
309 aa  519  1e-146  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0194  queuine/archaeosine tRNA-ribosyltransferase  24.3 
 
 
311 aa  68.2  0.0000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.0702448  n/a   
 
 
-
 
NC_009708  YpsIP31758_1231  fliB family protein  24.67 
 
 
397 aa  67.8  0.0000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1348  hypothetical protein  24.67 
 
 
397 aa  67.8  0.0000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0146  hypothetical protein  25.08 
 
 
311 aa  65.9  0.000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1163  lysine-N-methylase  22.67 
 
 
401 aa  50.8  0.00003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0865405  n/a   
 
 
-
 
NC_011205  SeD_A1286  lysine-N-methylase  22.33 
 
 
401 aa  49.7  0.00006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.172293  hitchhiker  0.00250753 
 
 
-
 
NC_011094  SeSA_A2113  lysine-N-methylase  21.69 
 
 
401 aa  42.7  0.008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.0582721 
 
 
-
 
NC_011080  SNSL254_A2119  lysine-N-methylase  21.55 
 
 
401 aa  42.4  0.01  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00000000610642 
 
 
-
 
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