Gene SeD_A1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1286 
Symbol 
ID6872070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1271551 
End bp1272756 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content47% 
IMG OID642784457 
Productlysine-N-methylase 
Protein accessionYP_002215130 
Protein GI198242088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.172293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00250753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAAA TCACCGTCAC TGAACCTGCC TTTGTCACCC GCTTTTCCTG TTCTGGCTCG 
GCCTGCCGCG ATCACTGTTG TAAGGGCTGG AAAATCACGC TGGATAAGAC GACGGTCAAA 
AAGTACCTTA CCAGCAAGGA TGTAACCATC AGAGAGATTG CCAAAAATAG TATTATTCTT 
TTAAAGAAAG ACCCAAATAA CTGGGGGGAG ATTAAATTAC CATCTGGGAC AGGAAGCTGC 
CCTTATCTGG ATGACGATCG TCTGTGCAAG GTACAAAAAA CACTGGGAGC TAAAGCATTA 
AGTTATACCT GCACTACGTT TCCGCGGGTG TTCCATACTT ATAAAAACGA GGTACGACAT 
TCTCTAAGCC TTGCCTGCCC GGAAGTGACT GCGCATATTT TAAACGATAC TGATGCGGTA 
ACACTCAATG AAAAGGCGAT CATTCAGCAG AAGTACAATA CCGCGCCGCT ATTCTCCCCA 
CAGCAAAAAC TACTTAACTT GTTTTGCCTG AGTTTGATTA ACCATGCTGC CAGCAATCCG 
GATGCGGCAT TATACGCGTT GATCAAGTTT GTAATGTACG TGCAGAAGTT TCCCCGGATT 
GATGACGCTG CATTAGGGGA GATTGAGCAA GTGTATGGCA CGTTAGTTTC CCAGTTGCAG 
TCCGGTTCGT TAACTCAGGA ACTCGCTAAT ATTACGCCGG ATAAGAAATT CAAAACATCC 
CTGGTACTGT TGATGCAGGA TTATTTCAGG GCTCTCCCAC CGAGCAGAGG AAGCTATGTC 
CTCGATCACT ATATCCAGTG TCTTCTGCGG GTGCTGACGG CGGAAGAGGG CGTTTCAATG 
GAGCAGAAGG TTAGCGATAT TGAGTCCTCA TTAGCGCGCT GTTTACAGGC GGATGAGCAG 
CAGAAGAACT GGGCCTTCAG AAATTTAATT CTCTATAAAA TTTGGGAAAA TAATTTCCCC 
AACCAGCCGA ATGTCGACCC GTTACGCGCG CTGTATATTA TCGTGGCGGA ATATGCCTTT 
ATTAAGCTAT TAACGGCAGC CAGTGTGCAT GAGCGCGGGC GGCTTGAGTG GGATGACGTT 
ACCAATATTG TGTATAGCTT TCACTCCCGC AGCCAGCATA ACAGCGAGGT GGCGGCGAAT 
TTTCATCGCC ATATAGAAAC GGTGCGTACT GGCGACGATC TGTCGATGAT TCATCTTCTG 
ACATAG
 
Protein sequence
MKEITVTEPA FVTRFSCSGS ACRDHCCKGW KITLDKTTVK KYLTSKDVTI REIAKNSIIL 
LKKDPNNWGE IKLPSGTGSC PYLDDDRLCK VQKTLGAKAL SYTCTTFPRV FHTYKNEVRH 
SLSLACPEVT AHILNDTDAV TLNEKAIIQQ KYNTAPLFSP QQKLLNLFCL SLINHAASNP 
DAALYALIKF VMYVQKFPRI DDAALGEIEQ VYGTLVSQLQ SGSLTQELAN ITPDKKFKTS 
LVLLMQDYFR ALPPSRGSYV LDHYIQCLLR VLTAEEGVSM EQKVSDIESS LARCLQADEQ 
QKNWAFRNLI LYKIWENNFP NQPNVDPLRA LYIIVAEYAF IKLLTAASVH ERGRLEWDDV 
TNIVYSFHSR SQHNSEVAAN FHRHIETVRT GDDLSMIHLL T