9 homologs were found in PanDaTox collection
for query gene Dshi_3171 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_3171  cobalamin (vitamin B12) biosynthesis CbiX protein  100 
 
 		 238 aa  467  1.0000000000000001e-131  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.704776 
 
 
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NC_008686  Pden_2332  cobalamin (vitamin B12) biosynthesis CbiX protein  38.3 
 
 		 230 aa  138  1e-31  Paracoccus denitrificans PD1222  Bacteria  normal  0.347215  normal  1 
 
 
-
 
NC_009428  Rsph17025_3047  cobalamin (vitamin B12) biosynthesis CbiX protein  42.66 
 
 		 233 aa  132  3.9999999999999996e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_1566  hypothetical protein  37.89 
 
 		 229 aa  132  6e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.616769  n/a   
 
 
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NC_009049  Rsph17029_0217  cobalamin (vitamin B12) biosynthesis CbiX protein  37.89 
 
 		 229 aa  129  3e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.72457 
 
 
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NC_008044  TM1040_1835  cobalamin (vitamin B12) biosynthesis CbiX protein  34.03 
 
 		 244 aa  122  4e-27  Ruegeria sp. TM1040  Bacteria  normal  0.171582  normal  0.548174 
 
 
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NC_013595  Sros_5921  hypothetical protein  34.21 
 
 		 250 aa  42.4  0.006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.173399  normal  0.0804167 
 
 
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NC_014210  Ndas_2179  cobalamin (vitamin B12) biosynthesis CbiX protein  31.48 
 
 		 230 aa  42.4  0.006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  hitchhiker  0.000198199  decreased coverage  0.000000457043 
 
 
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NC_009338  Mflv_2684  cobalamin (vitamin B12) biosynthesis CbiX protein  30.43 
 
 		 234 aa  42.4  0.007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.55876  normal  0.318359 
 
 
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