Gene Rsph17025_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3047 
Symbol 
ID5084386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3116613 
End bp3117314 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID640484618 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001169236 
Protein GI146279077 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGATG CGGGGCCCGC CGCGGTGATC GTTGCCCATG GGCAGCCCTC GGACCCCGTG 
CCGGCGGCGG CCGAGATCGC CGCACTGGCG GCGGCCGTGG CAAGGCACCT GCCCGGCTGG
CGCGTGCGTG CGGCGACGCT GGCCGAGCCG GGGGCGCTGG CCCGCGCGGT GCAGGGGGTG
CCGGGCGTCG TCTATCCGCT CTTCATGGCG GGGGGGTGGT TCACCCGCAC CAACCTGCCA
CGCCAGCTGG CCGCCGCGGG CGGAGAGGGC TGGCGCCTCT CCGAGCCGTT CGGAACCGAT
CCGGCGGTCC GCGATCTGAC GGTCGCCATC GCGCGTGAGG CCCTCGCCGT TGATCGGGCG
CCTGCGATCC TGCTGGCGGC GCATGGCTCC TTTCGCAGCA GCGCCCCGTC CGATGTCGCG
CACGCCATGG CCGAACGGCT CGAGCAGGAG CTGGGCCTGC CCTGCAAGGC CGCCTTCATC
GATCAGGAGC CGCGCATCGC GGAGGTCGCG CGGCGCATGC CGGAGGCGCT GTGCCTGCCC
TTCTTCGCGG CCCGCGGAGG ACATGTGGTG AGCGACCTTC CCCAGGCTCT GGCCGAGGCG
CAGTTCTGCG GCCCCGTGCT GGAGCCGGTG GGCCTCGATC CCCGCGCGCC CGCCCTGATC
GCGCGGGCCA TCGCCGCCCT TGGCACGGCA ACGGGCGGCT AG
 
Protein sequence
MEDAGPAAVI VAHGQPSDPV PAAAEIAALA AAVARHLPGW RVRAATLAEP GALARAVQGV 
PGVVYPLFMA GGWFTRTNLP RQLAAAGGEG WRLSEPFGTD PAVRDLTVAI AREALAVDRA
PAILLAAHGS FRSSAPSDVA HAMAERLEQE LGLPCKAAFI DQEPRIAEVA RRMPEALCLP
FFAARGGHVV SDLPQALAEA QFCGPVLEPV GLDPRAPALI ARAIAALGTA TGG