7 homologs were found in PanDaTox collection
for query gene Dshi_1500 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_1500  outer membrane chaperone Skp  100 
 
 		 191 aa  377  1e-104  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.92345  normal  1 
 
 
-
 
NC_007802  Jann_2452  hypothetical protein  47.37 
 
 		 199 aa  108  7.000000000000001e-23  Jannaschia sp. CCS1  Bacteria  normal  0.871205  hitchhiker  0.000445198 
 
 
-
 
NC_009428  Rsph17025_2145  outer membrane chaperone Skp (OmpH)  44.19 
 
 		 215 aa  99.8  2e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.26588  normal  1 
 
 
-
 
NC_008044  TM1040_1406  outer membrane chaperone Skp (OmpH)  40.54 
 
 		 181 aa  99  4e-20  Ruegeria sp. TM1040  Bacteria  normal  0.767965  normal  0.370194 
 
 
-
 
NC_007493  RSP_6204  hypothetical protein  44.03 
 
 		 230 aa  98.6  5e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.89318  n/a   
 
 
-
 
NC_009049  Rsph17029_1370  outer membrane chaperone Skp (OmpH)  44.03 
 
 		 230 aa  96.7  2e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.249097  decreased coverage  0.00550901 
 
 
-
 
NC_008687  Pden_4000  outer membrane chaperone Skp (OmpH)  37.86 
 
 		 259 aa  87.4  1e-16  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.419537 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>