Gene Dshi_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1500 
Symbol 
ID5712679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1561065 
End bp1561640 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID641267415 
Productouter membrane chaperone Skp 
Protein accessionYP_001532843 
Protein GI159044049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.92345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGCT GGCGGCTTTG GCGGGCCGTG GCGCTGGCCC TGTGTCTTCT GGCGGGGACG 
GGGACCGTCG CCGGTGCGCA GGAACGTATC CAGTCCAGTA TCCTCGTGAT CGAGCAGGAC
CGTCTGTTCC TCGAAACCTG GCTGGGCGCA CAGCTGATCG AGGATGTCGA CGCGCAGTCG
CGCGCGCTTG CCCTAGAGAA CCGCGAGATC GAGCGCACCC TGATCGAGGA AGAGCAGGCC
CTGACCACGT CGCGGCCCAC CATGACCCCG GAGGCGTTTC GCGAGGCCGC CGATGCATTC
GACGCGCGGG TCAACCGGAT CCGGAGTGCA CAGGACGCCA AGTCCCAGGC CCTGATCGAG
CAGCGGGAAC AGGCACGGGC GCAGTTCCTG GAACTGGTGC TGCCCATTCT CGGCGGGCTG
TTGTCGGATT ACGGGGCCTA TGTCTTTCTC GACCCGCGCC AGGTGTTCCT GTCCGATGAC
CGCATCAACG TGACGGACGA GGCGATTTCC CGCATCGATG CGACCTTCAC GGAGCCCGGC
GAGGCGGAGG CCCAAACACC CCCGACGCCG GAGTGA
 
Protein sequence
MRGWRLWRAV ALALCLLAGT GTVAGAQERI QSSILVIEQD RLFLETWLGA QLIEDVDAQS 
RALALENREI ERTLIEEEQA LTTSRPTMTP EAFREAADAF DARVNRIRSA QDAKSQALIE
QREQARAQFL ELVLPILGGL LSDYGAYVFL DPRQVFLSDD RINVTDEAIS RIDATFTEPG
EAEAQTPPTP E