9 homologs were found in PanDaTox collection
for query gene Pden_4000 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008687  Pden_4000  outer membrane chaperone Skp (OmpH)  100 
 
 		 259 aa  498  1e-140  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.419537 
 
 
-
 
NC_007802  Jann_2452  hypothetical protein  42.17 
 
 		 199 aa  112  4.0000000000000004e-24  Jannaschia sp. CCS1  Bacteria  normal  0.871205  hitchhiker  0.000445198 
 
 
-
 
NC_008044  TM1040_1406  outer membrane chaperone Skp (OmpH)  35.67 
 
 		 181 aa  102  8e-21  Ruegeria sp. TM1040  Bacteria  normal  0.767965  normal  0.370194 
 
 
-
 
NC_009952  Dshi_1500  outer membrane chaperone Skp  37.86 
 
 		 191 aa  97.1  3e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.92345  normal  1 
 
 
-
 
NC_009428  Rsph17025_2145  outer membrane chaperone Skp (OmpH)  36.87 
 
 		 215 aa  94.4  2e-18  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.26588  normal  1 
 
 
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NC_007493  RSP_6204  hypothetical protein  33.77 
 
 		 230 aa  85.5  7e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.89318  n/a   
 
 
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NC_009049  Rsph17029_1370  outer membrane chaperone Skp (OmpH)  33.77 
 
 		 230 aa  83.6  0.000000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.249097  decreased coverage  0.00550901 
 
 
-
 
NC_009719  Plav_3187  outer membrane chaperone Skp (OmpH)  24.36 
 
 		 197 aa  64.7  0.000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.559884  normal  1 
 
 
-
 
NC_013889  TK90_1488  outer membrane chaperone Skp (OmpH)  30.77 
 
 		 178 aa  42.4  0.007  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
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