Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2145 |
Symbol | |
ID | 5082923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2173770 |
End bp | 2174417 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640483708 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_001168340 |
Protein GI | 146278181 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.26588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGGC TTCCGGTCGT GGCCCTGGCC TGTGCGCTGG CCCTGCCGGG GGCAGCCCGT GCGCAGTCCG ACGCTGCCCC GGTTCCGGCC GGGGTCGCGG TCATCGACCA GAGCCGGCTC ATCACCGACA CCTCGCTCGG GCGCGCGCTC GAGCAGCGGT TCCTGGCGGC CTCGCGCGCC CTGATCGCCG AGAACCGCGA GATAGAGGCC GCGCTCGAGG CCGAGGAACG CGCGCTCACG GCGCAGCGCG GCAGCCTCGA GCCCGACGAG TTCCGGCGTC TGGCGGCCGA TTTCGACACC AGGGTCGAGG GCATCCGCGA CGCTCAGGAA GCCAAGTCGC GCGGTCTGAC GCGGCAGCGC GACGAAGAGC GGCAGCGCAT CGTCGAGCAG GCCCTGCCGA TCCTCGCCCG CCTGATGCAG GAGCGGGGGG CGATGGTGCT CATCGACCGC GGCTCTGTCG TCCTCTCGCG CGATGCGGCC GACATCACCG ACGAGGCGAT CGAACGGCTG GATGCCCGGA CGCCCGCAGA TGCGGCGCCT GCGGAGGGCG AGGCGGCCCC GTCGTCCGGC GCCGCGCCGC CGCAGGGGGC CGATGGCCCG CCGCCGCCCG CGGGCGAGGC GCCCCTGCCG CCACCCGCCT CACCATGA
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Protein sequence | MRRLPVVALA CALALPGAAR AQSDAAPVPA GVAVIDQSRL ITDTSLGRAL EQRFLAASRA LIAENREIEA ALEAEERALT AQRGSLEPDE FRRLAADFDT RVEGIRDAQE AKSRGLTRQR DEERQRIVEQ ALPILARLMQ ERGAMVLIDR GSVVLSRDAA DITDEAIERL DARTPADAAP AEGEAAPSSG AAPPQGADGP PPPAGEAPLP PPASP
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