12 homologs were found in PanDaTox collection
for query gene Dfer_5063 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_5063  NUMOD4 domain-containing protein  100 
 
 
190 aa  389  1e-107  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.996691  normal 
 
 
-
 
NC_013730  Slin_3019  hypothetical protein  70.47 
 
 
197 aa  268  2e-71  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4675  NUMOD4 domain-containing protein  42.39 
 
 
194 aa  129  2.0000000000000002e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0660  hypothetical protein  42.07 
 
 
189 aa  123  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.22037 
 
 
-
 
NC_004116  SAG1876  prophage LambdaSa2, HNH endonuclease family protein  32.17 
 
 
176 aa  55.1  0.0000007  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00409455  n/a   
 
 
-
 
NC_011894  Mnod_3568  HNH endonuclease  26.55 
 
 
214 aa  49.7  0.00002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3832  NUMOD4 domain-containing protein  34.78 
 
 
179 aa  44.3  0.001  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000000542576 
 
 
-
 
NC_012918  GM21_1450  HNH endonuclease  26.71 
 
 
174 aa  43.1  0.002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_1141  hypothetical protein  34.62 
 
 
163 aa  41.6  0.007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1512  HNH endonuclease family protein  31.3 
 
 
274 aa  41.6  0.008  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0327042  n/a   
 
 
-
 
NC_008530  LGAS_0604  homing nuclease  35.29 
 
 
243 aa  41.2  0.009  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000399673  normal 
 
 
-
 
NC_008530  LGAS_0666  homing nuclease  35.29 
 
 
243 aa  41.2  0.009  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000000787061  normal 
 
 
-
 
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