5 homologs were found in PanDaTox collection
for query gene Cpin_3900 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3900  hypothetical protein  100 
 
 
966 aa  1902    Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.048265 
 
 
-
 
NC_011898  Ccel_3035  Phage-related protein-like protein  27.27 
 
 
841 aa  60.5  0.0000002  Clostridium cellulolyticum H10  Bacteria  normal  0.716589  n/a   
 
 
-
 
NC_011898  Ccel_3282  Phage-related protein-like protein  27.27 
 
 
841 aa  60.5  0.0000002  Clostridium cellulolyticum H10  Bacteria  normal  0.858294  n/a   
 
 
-
 
NC_013037  Dfer_5517  hypothetical protein  29.55 
 
 
888 aa  59.7  0.0000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0931503  normal 
 
 
-
 
NC_008261  CPF_0965  hypothetical protein  26.03 
 
 
1070 aa  52  0.00006  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
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