Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5517 |
Symbol | |
ID | 8229132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6638851 |
End bp | 6641517 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644933364 |
Product | hypothetical protein |
Protein accession | YP_003089873 |
Protein GI | 255039252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0931503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCTG ATATCGGGTC AGCAAACATA CGGGTAGGTT CGACTGTTCA AGGTTTGATC GACGGGATGA AGCGTGTGTC TGCATCAGTT CGCAGTACCG TTTTTGAGAT CAATAACCGG TTAACGGATA GCTACAAGCG CGCGTCCAAA GAGCAGGCAG CATTCCGGGG AGGACTGTCA AAACTAAGCG GGGACTTGAC CGACATCAGT AAAAAGATGG CGATCGTCGG GGGCCTTCCT GCTCTTTTTG CGGCAGGGAA GGCATTCAAG GATTATGCCG AGCTTCAAAA GCTGCAACGC GGTCTCGAAC GCTATGGAGA GTCAATCGAA AGCGTTCGGG AGCTTGCGAA GTTGCCAAAT ATCGGCATTT TCGATGGAGC AAAGGCTCTC ATCGGCATGA AGGCAATGAA GCTTAATAGC GACCTGGCAA CACGGTCTTT GAAAGCTTTT GCAAACGCCA TCACCGACGC CGGCGGTTCT GCTGTCGACC TTGAACCGGC ATTAATCAAC CTGAACCAAT TCGTCCGCGG TCGTCACATC AACCAGGTTG ATTTGCGGCA GCTGGCGACC CGCATGCCCC AAACGTATGA TGCAATGGAG GCGGCTTTCG GCACCACAGA GGTCGAAAAG CTTAATGCGA AAATGCAGAG TATCGGCGTT ACGGCTTTTA TCGACAAGTT CGTAAAAGAG CTGGAAAAGA TTCCTTTCGC TGGTGGCGGC GCGGCAAACG CAATGGAGCA GCTCAGTGAT GCTACGACAT TCGCTTCTGC GGCGCTGGGT GAAGGAGCTG ATAAGGCTTT CGATATCACC GGCAAAATAG CCGGGCTTAC CAACATAGTC GACAATCTCA CATCAAATTT CCAGTCGCTC ACTCCTGAGG CTCAAAAATC CATCTATGCG GTCGGGGCCT TGGCGGTCGG CATGCCGATC CTTATCGGCG CGGTCGGAGG GCTCGTGAAA TTGTTGCCGC TCCTCGCAAC GGGATTCGGC GCGATCTCCG CTCCGATCAC TGCTACAATT GCGGTAGTGG GCGTGGCTGC TGCGGCCATA ATTACCAACT GGGATTCGGT TAAGAAGTTT TTGACCGATT CTACCTGGTG GACAACGCTT ACCGGCTTGG GTAAGTCCAC CCTCGGAGTG CTGATGGAAT CCTTCAAAGT TGTTCTGAAC CTGATTCAAG GTGATTGGGG CAACATGTGG AAGGCGCTCG TGAATATCGG CAAGAATGCG GCCAATGCCA TTGTGGATAC CATAGGCGGG ATTACAAAAG GGGCACTCGG TTTGTTTGGG ACGTTCAATG AGGCGCTCGG CTTCGATTCG ATGGGCCGCG GGATGAGCTC GGCGGTAAAG TATATCGACG GACTGACTCA AAAATTTCGT TTCGACGTGC CAGACTCTTT CGCGGCAGCT GGTAAGGCGA TCGATGGAGT TAAGGGAGCC ATGAGCAAGC TCGGCGGAGA ATCTGCCGCT CTGGCTCCGG CTGCTGGCGA TGCCGCCGAA TACTACGAGA AAATGTCGAA ATCGGCTTTC AAAATCTGGC AGATCGATCT GGCCGGCAAG TGGGCTGAGG AGCGCGAAGC ATTGAAGCAA AAAATCAAAT CCTATAAGGA ATTGATTGGA GTGACCGCGG CCCTGACTTT GGAACAGTTG AAGGCCAGGT CCATGGAAAT TCACGACAAA AAAGCGCAGC TAGGGGACAC GGTCGATGGT GGGCGCAGCC GAGCGAAGGC CATGGGCGCC GCCTTGATGG ATTCTCGGAT GAAGGAAACT CAGCAAGCGA TATCAAAATC AGCCGCGAAA TATTTTGGTG AAGGAAACTT GCAATTTGAT GCAGCATTTG ATTTGAATTC GATGTTCGGG TCCGCGTTTG AGCTAGATTC GGCGAAAAAT TACTTCAAAG GGTTTTCGAA GGCGGCGAAT GAATCACTCA CGCAGTATGC GGACCGTCTC CGAATGATTT TGGACGTGAC GGCTCAATTT AAGGATACCT TCGGATCGGC CTTTAATCTT GAAGACGCAA AAAAGTTCTT TAAAGAACTC CCTAAGGTCG CGAATCAATC GGGCGAGAAG TATGCGGAAG AGGTTCGAAA CATTGCTCAA TCCACTGCCC AAATGAATGC CGCCATTACT TCGGCGGTCC AAGGAGGGGC GGTTGATGCA TTCACCACGC TAGGTGAAAA GCTTGGGGAC AGTATGAGCG GACTGTCTGG TATCGGTGAC AAAATCTACT CTATCATAGG AAACTTGCTG GTTAACATTG GTAAGGCGTT GATTACATAC AATTCGGTAA TTCAAGGGTT GAAGGTGGCC ATAAAATCAA TGAACGGCTA TGTTGCGTTA GCGGCAGGTG TTCTTGCCAT CGCAGCGGGC ACCGTGTTGA AAAACAAGGT AGGCAAGATG GGGGAAACGA CACGTTTTGC GAAAGGTGGT TTTGCTTACG GTGAAATGAG TGCTATTGTC GGAGATAATC CAAACGCGCG CCATGACCCT GAGATGATTG CGCCATATAG CAAAGTCGAT AAATCTATTG AGAAGAGTAT CAAAATGCAT GGCGGATCCG GAGGGGTGCA GGTATTCATT CCTCGCCTAG AAATTGAAAA CGATAAATTC TACGTGGCCT TTAAGCGGTC GGAAGTGAAG TACAAAGCTT TATTGGGGGG TAGATAA
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Protein sequence | MQPDIGSANI RVGSTVQGLI DGMKRVSASV RSTVFEINNR LTDSYKRASK EQAAFRGGLS KLSGDLTDIS KKMAIVGGLP ALFAAGKAFK DYAELQKLQR GLERYGESIE SVRELAKLPN IGIFDGAKAL IGMKAMKLNS DLATRSLKAF ANAITDAGGS AVDLEPALIN LNQFVRGRHI NQVDLRQLAT RMPQTYDAME AAFGTTEVEK LNAKMQSIGV TAFIDKFVKE LEKIPFAGGG AANAMEQLSD ATTFASAALG EGADKAFDIT GKIAGLTNIV DNLTSNFQSL TPEAQKSIYA VGALAVGMPI LIGAVGGLVK LLPLLATGFG AISAPITATI AVVGVAAAAI ITNWDSVKKF LTDSTWWTTL TGLGKSTLGV LMESFKVVLN LIQGDWGNMW KALVNIGKNA ANAIVDTIGG ITKGALGLFG TFNEALGFDS MGRGMSSAVK YIDGLTQKFR FDVPDSFAAA GKAIDGVKGA MSKLGGESAA LAPAAGDAAE YYEKMSKSAF KIWQIDLAGK WAEEREALKQ KIKSYKELIG VTAALTLEQL KARSMEIHDK KAQLGDTVDG GRSRAKAMGA ALMDSRMKET QQAISKSAAK YFGEGNLQFD AAFDLNSMFG SAFELDSAKN YFKGFSKAAN ESLTQYADRL RMILDVTAQF KDTFGSAFNL EDAKKFFKEL PKVANQSGEK YAEEVRNIAQ STAQMNAAIT SAVQGGAVDA FTTLGEKLGD SMSGLSGIGD KIYSIIGNLL VNIGKALITY NSVIQGLKVA IKSMNGYVAL AAGVLAIAAG TVLKNKVGKM GETTRFAKGG FAYGEMSAIV GDNPNARHDP EMIAPYSKVD KSIEKSIKMH GGSGGVQVFI PRLEIENDKF YVAFKRSEVK YKALLGGR
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