Gene Dfer_5517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5517 
Symbol 
ID8229132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6638851 
End bp6641517 
Gene Length2667 bp 
Protein Length888 aa 
Translation table11 
GC content51% 
IMG OID644933364 
Producthypothetical protein 
Protein accessionYP_003089873 
Protein GI255039252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0931503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTG ATATCGGGTC AGCAAACATA CGGGTAGGTT CGACTGTTCA AGGTTTGATC 
GACGGGATGA AGCGTGTGTC TGCATCAGTT CGCAGTACCG TTTTTGAGAT CAATAACCGG
TTAACGGATA GCTACAAGCG CGCGTCCAAA GAGCAGGCAG CATTCCGGGG AGGACTGTCA
AAACTAAGCG GGGACTTGAC CGACATCAGT AAAAAGATGG CGATCGTCGG GGGCCTTCCT
GCTCTTTTTG CGGCAGGGAA GGCATTCAAG GATTATGCCG AGCTTCAAAA GCTGCAACGC
GGTCTCGAAC GCTATGGAGA GTCAATCGAA AGCGTTCGGG AGCTTGCGAA GTTGCCAAAT
ATCGGCATTT TCGATGGAGC AAAGGCTCTC ATCGGCATGA AGGCAATGAA GCTTAATAGC
GACCTGGCAA CACGGTCTTT GAAAGCTTTT GCAAACGCCA TCACCGACGC CGGCGGTTCT
GCTGTCGACC TTGAACCGGC ATTAATCAAC CTGAACCAAT TCGTCCGCGG TCGTCACATC
AACCAGGTTG ATTTGCGGCA GCTGGCGACC CGCATGCCCC AAACGTATGA TGCAATGGAG
GCGGCTTTCG GCACCACAGA GGTCGAAAAG CTTAATGCGA AAATGCAGAG TATCGGCGTT
ACGGCTTTTA TCGACAAGTT CGTAAAAGAG CTGGAAAAGA TTCCTTTCGC TGGTGGCGGC
GCGGCAAACG CAATGGAGCA GCTCAGTGAT GCTACGACAT TCGCTTCTGC GGCGCTGGGT
GAAGGAGCTG ATAAGGCTTT CGATATCACC GGCAAAATAG CCGGGCTTAC CAACATAGTC
GACAATCTCA CATCAAATTT CCAGTCGCTC ACTCCTGAGG CTCAAAAATC CATCTATGCG
GTCGGGGCCT TGGCGGTCGG CATGCCGATC CTTATCGGCG CGGTCGGAGG GCTCGTGAAA
TTGTTGCCGC TCCTCGCAAC GGGATTCGGC GCGATCTCCG CTCCGATCAC TGCTACAATT
GCGGTAGTGG GCGTGGCTGC TGCGGCCATA ATTACCAACT GGGATTCGGT TAAGAAGTTT
TTGACCGATT CTACCTGGTG GACAACGCTT ACCGGCTTGG GTAAGTCCAC CCTCGGAGTG
CTGATGGAAT CCTTCAAAGT TGTTCTGAAC CTGATTCAAG GTGATTGGGG CAACATGTGG
AAGGCGCTCG TGAATATCGG CAAGAATGCG GCCAATGCCA TTGTGGATAC CATAGGCGGG
ATTACAAAAG GGGCACTCGG TTTGTTTGGG ACGTTCAATG AGGCGCTCGG CTTCGATTCG
ATGGGCCGCG GGATGAGCTC GGCGGTAAAG TATATCGACG GACTGACTCA AAAATTTCGT
TTCGACGTGC CAGACTCTTT CGCGGCAGCT GGTAAGGCGA TCGATGGAGT TAAGGGAGCC
ATGAGCAAGC TCGGCGGAGA ATCTGCCGCT CTGGCTCCGG CTGCTGGCGA TGCCGCCGAA
TACTACGAGA AAATGTCGAA ATCGGCTTTC AAAATCTGGC AGATCGATCT GGCCGGCAAG
TGGGCTGAGG AGCGCGAAGC ATTGAAGCAA AAAATCAAAT CCTATAAGGA ATTGATTGGA
GTGACCGCGG CCCTGACTTT GGAACAGTTG AAGGCCAGGT CCATGGAAAT TCACGACAAA
AAAGCGCAGC TAGGGGACAC GGTCGATGGT GGGCGCAGCC GAGCGAAGGC CATGGGCGCC
GCCTTGATGG ATTCTCGGAT GAAGGAAACT CAGCAAGCGA TATCAAAATC AGCCGCGAAA
TATTTTGGTG AAGGAAACTT GCAATTTGAT GCAGCATTTG ATTTGAATTC GATGTTCGGG
TCCGCGTTTG AGCTAGATTC GGCGAAAAAT TACTTCAAAG GGTTTTCGAA GGCGGCGAAT
GAATCACTCA CGCAGTATGC GGACCGTCTC CGAATGATTT TGGACGTGAC GGCTCAATTT
AAGGATACCT TCGGATCGGC CTTTAATCTT GAAGACGCAA AAAAGTTCTT TAAAGAACTC
CCTAAGGTCG CGAATCAATC GGGCGAGAAG TATGCGGAAG AGGTTCGAAA CATTGCTCAA
TCCACTGCCC AAATGAATGC CGCCATTACT TCGGCGGTCC AAGGAGGGGC GGTTGATGCA
TTCACCACGC TAGGTGAAAA GCTTGGGGAC AGTATGAGCG GACTGTCTGG TATCGGTGAC
AAAATCTACT CTATCATAGG AAACTTGCTG GTTAACATTG GTAAGGCGTT GATTACATAC
AATTCGGTAA TTCAAGGGTT GAAGGTGGCC ATAAAATCAA TGAACGGCTA TGTTGCGTTA
GCGGCAGGTG TTCTTGCCAT CGCAGCGGGC ACCGTGTTGA AAAACAAGGT AGGCAAGATG
GGGGAAACGA CACGTTTTGC GAAAGGTGGT TTTGCTTACG GTGAAATGAG TGCTATTGTC
GGAGATAATC CAAACGCGCG CCATGACCCT GAGATGATTG CGCCATATAG CAAAGTCGAT
AAATCTATTG AGAAGAGTAT CAAAATGCAT GGCGGATCCG GAGGGGTGCA GGTATTCATT
CCTCGCCTAG AAATTGAAAA CGATAAATTC TACGTGGCCT TTAAGCGGTC GGAAGTGAAG
TACAAAGCTT TATTGGGGGG TAGATAA
 
Protein sequence
MQPDIGSANI RVGSTVQGLI DGMKRVSASV RSTVFEINNR LTDSYKRASK EQAAFRGGLS 
KLSGDLTDIS KKMAIVGGLP ALFAAGKAFK DYAELQKLQR GLERYGESIE SVRELAKLPN
IGIFDGAKAL IGMKAMKLNS DLATRSLKAF ANAITDAGGS AVDLEPALIN LNQFVRGRHI
NQVDLRQLAT RMPQTYDAME AAFGTTEVEK LNAKMQSIGV TAFIDKFVKE LEKIPFAGGG
AANAMEQLSD ATTFASAALG EGADKAFDIT GKIAGLTNIV DNLTSNFQSL TPEAQKSIYA
VGALAVGMPI LIGAVGGLVK LLPLLATGFG AISAPITATI AVVGVAAAAI ITNWDSVKKF
LTDSTWWTTL TGLGKSTLGV LMESFKVVLN LIQGDWGNMW KALVNIGKNA ANAIVDTIGG
ITKGALGLFG TFNEALGFDS MGRGMSSAVK YIDGLTQKFR FDVPDSFAAA GKAIDGVKGA
MSKLGGESAA LAPAAGDAAE YYEKMSKSAF KIWQIDLAGK WAEEREALKQ KIKSYKELIG
VTAALTLEQL KARSMEIHDK KAQLGDTVDG GRSRAKAMGA ALMDSRMKET QQAISKSAAK
YFGEGNLQFD AAFDLNSMFG SAFELDSAKN YFKGFSKAAN ESLTQYADRL RMILDVTAQF
KDTFGSAFNL EDAKKFFKEL PKVANQSGEK YAEEVRNIAQ STAQMNAAIT SAVQGGAVDA
FTTLGEKLGD SMSGLSGIGD KIYSIIGNLL VNIGKALITY NSVIQGLKVA IKSMNGYVAL
AAGVLAIAAG TVLKNKVGKM GETTRFAKGG FAYGEMSAIV GDNPNARHDP EMIAPYSKVD
KSIEKSIKMH GGSGGVQVFI PRLEIENDKF YVAFKRSEVK YKALLGGR