14 homologs were found in PanDaTox collection
for query gene Cpin_2530 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_2530  Ethyl tert-butyl ether degradation EthD  100 
 
 		 116 aa  240  3.9999999999999997e-63  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2840  Ethyl tert-butyl ether degradation EthD  49.55 
 
 		 111 aa  128  2.0000000000000002e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.568701  n/a   
 
 
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NC_013132  Cpin_3492  Ethyl tert-butyl ether degradation EthD  44.14 
 
 		 111 aa  116  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_3831  Ethyl tert-butyl ether degradation EthD  38.94 
 
 		 113 aa  104  5e-22  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.654041 
 
 
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NC_010335  Caul_5271  ethyl tert-butyl ether degradation EthD  30.91 
 
 		 113 aa  69.3  0.00000000002  Caulobacter sp. K31  Bacteria  normal  0.357656  hitchhiker  0.000208925 
 
 
-
 
NC_009427  Saro_3720  ethyl tert-butyl ether degradation EthD  33.04 
 
 		 274 aa  60.5  0.000000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.81836  n/a   
 
 
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NC_007348  Reut_B3850  ethyl tert-butyl ether degradation EthD  30.69 
 
 		 230 aa  56.2  0.0000001  Ralstonia eutropha JMP134  Bacteria  normal  0.421261  n/a   
 
 
-
 
NC_013922  Nmag_1020  Ethyl tert-butyl ether degradation EthD  28.21 
 
 		 238 aa  50.4  0.000007  Natrialba magadii ATCC 43099  Archaea  normal  0.0532552  n/a   
 
 
-
 
NC_011004  Rpal_5311  Ethyl tert-butyl ether degradation EthD  22.95 
 
 		 124 aa  50.4  0.000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_3012  ethyl tert-butyl ether degradation EthD  28.57 
 
 		 127 aa  49.7  0.00001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.675409 
 
 
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NC_013743  Htur_2874  Ethyl tert-butyl ether degradation EthD  26.96 
 
 		 253 aa  44.7  0.0004  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_2091  Ethyl tert-butyl ether degradation EthD  25.23 
 
 		 227 aa  44.3  0.0006  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal  0.246638 
 
 
-
 
NC_009511  Swit_1862  hypothetical protein  22.22 
 
 		 249 aa  42.4  0.002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.530634 
 
 
-
 
NC_009511  Swit_2009  ethyl tert-butyl ether degradation EthD  22.03 
 
 		 125 aa  41.6  0.004  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
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