Gene Cpin_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2530 
Symbol 
ID8358689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3105222 
End bp3105572 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content39% 
IMG OID644964713 
ProductEthyl tert-butyl ether degradation EthD 
Protein accessionYP_003122215 
Protein GI256421562 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT TCACATTTCT AATCCGCCGG ACTGATGGTA TGAGTAAAGA AGATTTCATT 
AATTACCATC GTCAGCATCA TGCGCCGTTA TTTATGTCCA TTCCTGAATC TCAAAAGTAC
GTTAAAAAAT ATGTTGTCTC CCATCCTACC GAAGTAGCAG GTTTTCCCGC GCCTCAATAC
GATGGTGTCA CTGACATCTA CTTCTCTTCA ATGGAAGATT TCAATACGTT TTTCTCCAGC
GAAAATTACA AACTGAAGGT ACATCCGGAC GAAAGTAATT TCTTCAAGTT GAATGAGGTA
GTAAGCCTGG TCTGTGACGA AAAAATAGTA GTCGATGTAA CAATAGCATA A
 
Protein sequence
MLKFTFLIRR TDGMSKEDFI NYHRQHHAPL FMSIPESQKY VKKYVVSHPT EVAGFPAPQY 
DGVTDIYFSS MEDFNTFFSS ENYKLKVHPD ESNFFKLNEV VSLVCDEKIV VDVTIA