| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3720 |
|---|
| Symbol | |
|---|
| ID | 5077868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 356723 |
|---|
| End bp | 357547 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481443 |
|---|
| Product | ethyl tert-butyl ether degradation EthD |
|---|
| Protein accession | YP_001166105 |
|---|
| Protein GI | 146275945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02118] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.81836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGG CCATCGCATT GCTGCGCCGC AAGCAGGGGC TGAGCCGCGA ACAGTTCATC
GCCTACTACG AAACCCGCCA CGCGCCGCTG ATCCGTTCGC TCCTGCCTGG CATCGAGGAC
TATCGGCGCA ATTACGTGGA CCGGACCGGA GCGTTCGAAA GCGGCATTGC GGCAATCGAC
TTCGACAGCG TGACCGAAAT GCGCTTTGCC TCTCGCGCAT CGTATGACGC ATTCCTGGCG
CAGGCGGCAG ATCCGGAGAT CGCGCGACTG ATCGCCGATG ACGAGGAGAA CGTCTTCGAC
CGCAGCGCGA CGCGCATGTT CGTGGTGGAC GAGACGCCCG CAGCCCTTTC GCCCGACACG
CCTTCTCCCG TCCTCATCGA CGAGCTGCTG GCCGAACGTG CGATCCGCGA CGGGCTGGCA
CGGTTCGCGC GCGTCCTGGA TGCCAAGGCA TGGGACGCGC TGGGCGATGT CTTCGCCGCA
GACCTCACCT TCGACTATGG CCTTGGCGAA CAAGTCGGGC TGGAAGCGCT GACCGTCAAC
ATGCGCCGCT TTCTCGACGT CTGCGGACCG AGCCAGCACC TGATCGGCAG CATCATGATC
ACGGTCGATC CCGGCTTGCA ATCAGCGACC AGCAGGGCCT ATGTCCGGGC GCGGCACCAG
CGCGCAGGCA ACAGCGGCGG TCCGGTGTTC GACAGCAATG GCGAATATGT CGACCGCTGG
GAATGCCGCG CCGAAGGCTG GCGGATCGTC CGCCGCGACG CCCTGTGGCA GACACAGAGC
GGCGAGGCGG CGATCATCTG GGACGGAAGC CCCGCGGCCG GCTGA
|
|---|
| Protein sequence | MIKAIALLRR KQGLSREQFI AYYETRHAPL IRSLLPGIED YRRNYVDRTG AFESGIAAID
FDSVTEMRFA SRASYDAFLA QAADPEIARL IADDEENVFD RSATRMFVVD ETPAALSPDT
PSPVLIDELL AERAIRDGLA RFARVLDAKA WDALGDVFAA DLTFDYGLGE QVGLEALTVN
MRRFLDVCGP SQHLIGSIMI TVDPGLQSAT SRAYVRARHQ RAGNSGGPVF DSNGEYVDRW
ECRAEGWRIV RRDALWQTQS GEAAIIWDGS PAAG
|
|---|
| |