30 homologs were found in PanDaTox collection
for query gene Cfla_R0052 on replicon NC_014151
Organism: Cellulomonas flavigena DSM 20109



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014151  Cfla_R0052  SRP RNA; RNA component of signal recognition particle  100 
 
 		 92 bp  182  1e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.100687  decreased coverage  0.00000833927 
 
 
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NC_009664  Krad_R0006  SRP RNA; RNA component of signal recognition particle  94.32 
 
 		 93 bp  135  1.9999999999999998e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.558781  normal  0.197707 
 
 
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NC_013521  Sked_04670    93.1 
 
 		 100 bp  125  2e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.310268  normal  0.967006 
 
 
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NC_007777  Francci3_R0006  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 92 bp  99.6  1e-19  Frankia sp. CcI3  Bacteria  normal  0.747626  normal  1 
 
 
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NC_013530  Xcel_R0010  SRP RNA; RNA component of signal recognitionparti cle  88.76 
 
 		 93 bp  97.6  4e-19  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
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NC_013174  Jden_R0011  SRP RNA; RNA component of signal recognitionparti cle  92.11 
 
 		 90 bp  95.6  2e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  0.207458  normal  1 
 
 
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NC_009921  Franean1_R0055  SRP RNA; RNA component of signal recognition particle  92.42 
 
 		 99 bp  91.7  3e-17  Frankia sp. EAN1pec  Bacteria  normal  0.603304  normal  1 
 
 
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NC_013172  Bfae_28600    89.47 
 
 		 104 bp  87.7  4e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
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NC_008578  Acel_R0058  SRP RNA; RNA component of signal recognition particle  92.06 
 
 		 91 bp  85.7  0.000000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
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NC_008699  Noca_R0009  SRP RNA; RNA component of signal recognition particle  92.73 
 
 		 91 bp  77.8  0.0000000000004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
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NC_013235  Namu_R0009  SRP RNA; RNA component of signalrecognitionparti cle  94 
 
 		 90 bp  75.8  0.000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
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NC_012803  Mlut_02680  Bacterial signal recognition particle RNA  90.32 
 
 		 100 bp  75.8  0.000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.218549  n/a   
 
 
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NC_014210  Ndas_R0060  SRP RNA; RNA component of signal recognition particle  89.23 
 
 		 91 bp  73.8  0.000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.48161  normal  1 
 
 
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NC_013510  Tcur_R0074  SRP RNA; RNA component of signal recognitionparti cle  89.23 
 
 		 91 bp  73.8  0.000000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
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NC_007333  Tfu_R0003  SRP RNA; RNA component of signal recognitionparticle  87.5 
 
 		 92 bp  63.9  0.000000006  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
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NC_008726  Mvan_R0058  SRP RNA; RNA component of signal recognition particle  88.14 
 
 		 93 bp  61.9  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0164888  normal  1 
 
 
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NC_013595  Sros_R0087  SRP RNA; RNA component of signal recognitionparti cle  87.3 
 
 		 91 bp  61.9  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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NC_014165  Tbis_R0064  SRP RNA; RNA component of signal recognitionparti cle  85.06 
 
 		 89 bp  61.9  0.00000002  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.787076 
 
 
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NC_013947  Snas_R0050  SRP RNA; RNA component of signal recognitionparti cle  87.88 
 
 		 89 bp  60  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.222343  normal  1 
 
 
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NC_009338  Mflv_R0010  SRP RNA; RNA component of signal recognition particle  96.88 
 
 		 93 bp  56  0.000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751419  normal  0.854673 
 
 
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NC_013441  Gbro_R0009  SRP RNA; RNA component of signal recognitionparti cle  96.88 
 
 		 92 bp  56  0.000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_009077  Mjls_R0051  SRP RNA; RNA component of signal recognition particle  96.88 
 
 		 93 bp  56  0.000002  Mycobacterium sp. JLS  Bacteria  normal  0.415125  normal  1 
 
 
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NC_008705  Mkms_R0053  SRP RNA; RNA component of signal recognition particle  96.88 
 
 		 94 bp  56  0.000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
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NC_013093  Amir_R0010  SRP RNA; RNA component of signal recognitionparti cle  88.24 
 
 		 100 bp  54  0.000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013159  Svir_36630  bacterial signal recognition particle RNA  96.77 
 
 		 102 bp  54  0.000006  Saccharomonospora viridis DSM 43017  Bacteria  decreased coverage  0.00364935  normal  0.318237 
 
 
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NC_013501  Rmar_R0038  SRP RNA; RNA component of signal recognitionparti cle  96.67 
 
 		 108 bp  52  0.00002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.263697  n/a   
 
 
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NC_011886  Achl_R0008  SRP RNA; RNA component of signal recognitionparti cle  84.62 
 
 		 90 bp  50.1  0.00009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
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NC_008541  Arth_R0009  SRP RNA; RNA component of signal recognition particle  84.62 
 
 		 90 bp  50.1  0.00009  Arthrobacter sp. FB24  Bacteria  normal  0.408467  n/a   
 
 
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NC_010577  XfasM23_R0019    96.3 
 
 		 115 bp  46.1  0.001  Xylella fastidiosa M23  Bacteria  normal  0.133549  n/a   
 
 
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NC_010513  Xfasm12_R0019  SRP RNA; RNA component of signal recognition particle  96.3 
 
 		 115 bp  46.1  0.001  Xylella fastidiosa M12  Bacteria  hitchhiker  0.000590922  n/a   
 
 
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