27 homologs were found in PanDaTox collection
for query gene Sros_R0087 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013595  Sros_R0087  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 91 bp  180  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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NC_014165  Tbis_R0064  SRP RNA; RNA component of signal recognitionparti cle  96.63 
 
 		 89 bp  153  8.999999999999999e-36  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.787076 
 
 
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NC_013510  Tcur_R0074  SRP RNA; RNA component of signal recognitionparti cle  96.55 
 
 		 91 bp  149  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
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NC_013947  Snas_R0050  SRP RNA; RNA component of signal recognitionparti cle  93.59 
 
 		 89 bp  115  2.0000000000000002e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.222343  normal  1 
 
 
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NC_007333  Tfu_R0003  SRP RNA; RNA component of signal recognitionparticle  91.76 
 
 		 92 bp  113  7.000000000000001e-24  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
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NC_014210  Ndas_R0060  SRP RNA; RNA component of signal recognition particle  90.8 
 
 		 91 bp  109  1e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.48161  normal  1 
 
 
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NC_007777  Francci3_R0006  SRP RNA; RNA component of signal recognition particle  90.91 
 
 		 92 bp  103  7e-21  Frankia sp. CcI3  Bacteria  normal  0.747626  normal  1 
 
 
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NC_013159  Svir_36630  bacterial signal recognition particle RNA  98.21 
 
 		 102 bp  103  7e-21  Saccharomonospora viridis DSM 43017  Bacteria  decreased coverage  0.00364935  normal  0.318237 
 
 
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NC_009921  Franean1_R0055  SRP RNA; RNA component of signal recognition particle  94.64 
 
 		 99 bp  87.7  4e-16  Frankia sp. EAN1pec  Bacteria  normal  0.603304  normal  1 
 
 
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NC_009664  Krad_R0006  SRP RNA; RNA component of signal recognition particle  88.51 
 
 		 93 bp  85.7  0.000000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.558781  normal  0.197707 
 
 
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NC_013093  Amir_R0010  SRP RNA; RNA component of signal recognitionparti cle  93.1 
 
 		 100 bp  83.8  0.000000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_008578  Acel_R0058  SRP RNA; RNA component of signal recognition particle  87.36 
 
 		 91 bp  77.8  0.0000000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
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NC_008705  Mkms_R0053  SRP RNA; RNA component of signal recognition particle  90 
 
 		 94 bp  75.8  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
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NC_009077  Mjls_R0051  SRP RNA; RNA component of signal recognition particle  90 
 
 		 93 bp  75.8  0.000000000002  Mycobacterium sp. JLS  Bacteria  normal  0.415125  normal  1 
 
 
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NC_009338  Mflv_R0010  SRP RNA; RNA component of signal recognition particle  90 
 
 		 93 bp  75.8  0.000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751419  normal  0.854673 
 
 
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NC_008726  Mvan_R0058  SRP RNA; RNA component of signal recognition particle  88.57 
 
 		 93 bp  67.9  0.0000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0164888  normal  1 
 
 
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NC_013441  Gbro_R0009  SRP RNA; RNA component of signal recognitionparti cle  93.88 
 
 		 92 bp  65.9  0.000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_013530  Xcel_R0010  SRP RNA; RNA component of signal recognitionparti cle  89.29 
 
 		 93 bp  63.9  0.000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
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NC_014151  Cfla_R0052  SRP RNA; RNA component of signal recognition particle  87.3 
 
 		 92 bp  61.9  0.00000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.100687  decreased coverage  0.00000833927 
 
 
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NC_014158  Tpau_R0052  SRP RNA; RNA component of signal recognitionparti cle  87.14 
 
 		 92 bp  60  0.00000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
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NC_010730  SYO3AOP1_R0052  SRP RNA; RNA component of signal recognition particle  94.74 
 
 		 98 bp  60  0.00000009  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
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NC_013521  Sked_04670    84.27 
 
 		 100 bp  58  0.0000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.310268  normal  0.967006 
 
 
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NC_008699  Noca_R0009  SRP RNA; RNA component of signal recognition particle  87.04 
 
 		 91 bp  52  0.00002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
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NC_013235  Namu_R0009  SRP RNA; RNA component of signalrecognitionparti cle  96.55 
 
 		 90 bp  50.1  0.00009  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
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NC_011886  Achl_R0008  SRP RNA; RNA component of signal recognitionparti cle  86.15 
 
 		 90 bp  50.1  0.00009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
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NC_008541  Arth_R0009  SRP RNA; RNA component of signal recognition particle  86.15 
 
 		 90 bp  50.1  0.00009  Arthrobacter sp. FB24  Bacteria  normal  0.408467  n/a   
 
 
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NC_013174  Jden_R0011  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 90 bp  48.1  0.0004  Jonesia denitrificans DSM 20603  Bacteria  normal  0.207458  normal  1 
 
 
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