8 homologs were found in PanDaTox collection
for query gene Ccel_1448 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_1448  tetratricopeptide TPR_2  100 
 
 
374 aa  747    Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1383  tetratricopeptide TPR_2  30.61 
 
 
385 aa  173  3.9999999999999995e-42  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0475  TPR repeat-containing protein  24.19 
 
 
469 aa  98.6  2e-19  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000269672  n/a   
 
 
-
 
NC_009012  Cthe_2380  TPR repeat-containing protein  30.59 
 
 
246 aa  58.9  0.0000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0501  putative lipoprotein  37.35 
 
 
254 aa  52  0.00001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_00175  TPR-domain containing protein  44.44 
 
 
1006 aa  48.9  0.0001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2791  TPR repeat-containing protein  40.98 
 
 
243 aa  48.1  0.0002  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.185879 
 
 
-
 
NC_007517  Gmet_3014  putative lipoprotein  29.21 
 
 
249 aa  45.1  0.002  Geobacter metallireducens GS-15  Bacteria  normal  0.6887  normal 
 
 
-
 
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