| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1383 |
|---|
| Symbol | |
|---|
| ID | 4809378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1688143 |
|---|
| End bp | 1689300 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640106807 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_001037808 |
|---|
| Protein GI | 125973898 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATT TTAAAAATGA GCTTCAAAAT TATCCAATGA TTGATTTGGA TAAGTTGTCC
CAGGCGAACC CGAACATACC TGACAATATA AAAAATTCAA TTGTGCTTTA CAATAAAGCT
TTGGAGGATT TTCGCGCAAA AAGCGAGGAT ATAGCCATAA TTGAGCTTAA AAAAGCCATT
TCCCTGAATC CGGATTTTCA TGAGGCAATG AATTTGTTAG GTATCTTCTA TATGTATATA
GGAGAGAACG ATAAAGCTGC AGAAGTTTTC CAAAAAGTTG TGGATGCGGA AAAAAACAGC
GTAATGGCGA TGAGATATTT AAAAGAAATT GATTCCGGGT ATGATCCTGT CGGAAATAAA
CAGGAAAAGG ATAAAAAATC CAGGAAGAAG AAAGAAAGAA ACAGAGGGGC AGCTCAGCTT
TCAAACCAGG TGACGGTAAA AAGCAGTGCC TCTTTTTCCT TTAAGAAGCT GATAAAAATA
TGGGAATACA AGCCCATGGA CACGGCAAGA CTGTTTTTGG GATTTGTAAT TGGTGCTCTT
CTGGTTTTCC TCTTAAGTTA TAATTATTAT TTCAGAGAAG AGAATAATGA GCAATTGGAG
CAGTTAACAG AGGAAAATAA CACTCTTATT GGAGAAAAAA ATGAGATTCA GAAAAAGTAT
GATGAACTGA ACGAGAAATA TCAGGGATTA AACGACACGT TTGAAGAAGT GAAAAAGCAG
GTTGACTATT ATTTGAATGC TTCAAAACTT CTTCAAATTG AGAAATATGC TTCCCAGAAC
CAGTATCGTG AAGCGGCCGA TTTATTATTG TTATTGAAAA ACACCGCATT TACCGGAGTG
GAAAAAGAAA AGTTTGACAA ATTATCCCAG GATGTCATGC CTAAAGCTGC GCAGGAAGAA
TATAATAAAG GAAGAGAATT GTACAACAGA AAAAATTACC AGGAAGCCGT GGAGAGATTT
GAAAGATCCC GCTCTTACAG TGACAATTGG AGGTATGCGG TAAATAATCT CTATTATCTG
GGAGTATGCT ATCAGGAACT CAACAACACC ACCAAGGCTT TGGAGATATT TGAAGAGGTT
GTAAATAAAT ATCCGAACAC TTCCTATGCC GGATACTCAA GGGAACGTAT AAACTATATA
CGAGGCAGCC AGCAATGA
|
|---|
| Protein sequence | MIDFKNELQN YPMIDLDKLS QANPNIPDNI KNSIVLYNKA LEDFRAKSED IAIIELKKAI
SLNPDFHEAM NLLGIFYMYI GENDKAAEVF QKVVDAEKNS VMAMRYLKEI DSGYDPVGNK
QEKDKKSRKK KERNRGAAQL SNQVTVKSSA SFSFKKLIKI WEYKPMDTAR LFLGFVIGAL
LVFLLSYNYY FREENNEQLE QLTEENNTLI GEKNEIQKKY DELNEKYQGL NDTFEEVKKQ
VDYYLNASKL LQIEKYASQN QYREAADLLL LLKNTAFTGV EKEKFDKLSQ DVMPKAAQEE
YNKGRELYNR KNYQEAVERF ERSRSYSDNW RYAVNNLYYL GVCYQELNNT TKALEIFEEV
VNKYPNTSYA GYSRERINYI RGSQQ
|
|---|
| |