Gene Cphy_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0475 
Symbol 
ID5745235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp604922 
End bp606331 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content35% 
IMG OID641291587 
ProductTPR repeat-containing protein 
Protein accessionYP_001557601 
Protein GI160878633 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000269672 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGTC CAAAGTGCGG CAATGTGGTC GCAGTTCGAA GAAACAGATG TGAATTTTGC 
GGGAAAGATT TAACGATCGT AAGAAAAACT GACCGATTAT CCAATACTTA TTATAATCGT
GGTTTAGAAA AAGCAAAGGT TAGAGACTTG ACCGGAGCTA TAATCATGTT AAAGAAAAGC
TTGGAGATGA ATAAGAGAAA TACCAATGCT AGAAATCTCC TCGGACTTGT GTTCTTTGAG
ATGGGAGAAA CAGTAGCCGC ATTAAGTGAA TGGGTTATTA GTAAACATTT CCAGGCAAAA
GACAACGATG CCGATGTCTA TATTGGTGCA GTGCAGGCGA ATCCAACGAA ATTGGATTCG
ATGAATCAAG CTATAAAAAA GTATAATATT GCATTAGATT CCGCAAAGCA AGGTAGCGAT
GATCTGGCAA TTATTCAACT AAAAAAAGTT ATCAATTTAA ATCCGCACTT TATTCGTGCA
CTTCAATTAT TAGCATTGAT TTATATGAAG AATAATGAAT TTGAACGTGC AAGAAGGTGC
TTAGTTAAAG CAAATAAGAT AGATTTAGCG AATACTACTA CATTACGTTA CTTAAGCGAG
TTAAATCAGT TGGTAAGCGG TGGAGAAACT ACCTCTACAC CATATTGGAG TGATGGAGAA
GTAAATCCAG ATCCGCTAGG TAAACCATTA TCTCCAATTT CATCTTATAG GGAAGAAAAG
CCGAATGTAT GGCTCTTTAT TAATCTTATC TTAGGTGTTG TTATTGGTGT TTCTGTACTC
TTTTTCTTAA TTGTTCCAAC TGTAAAGAAA AATGCGCAGA GTGAATATTT GCAAAAACAA
CGTGATTTTG ATAGCGATCT TTTAGTATAT CGTACCAAAC TTACTTCTAG TGAAAAAGAA
GTGGAAGATT TAAAAGCAAA ACTTGCAGAC AAGCAGAAGG AATTAGATAA TATTGATATT
CCAGAATACG ATAAAACAAT GTACGATAGT ATTTTAAGTG CAGTATATCG TTATATGGAA
TTAGAATCAA CCAATAGTTT AACACCGGAA AATACGATGG AAGTTGCTGA TTTATTATCG
AAAGTGGATC CTTCTAAGAT GGAAAATCAA GATGCCGTTA AATTATTTGA AATGGTAAAG
GAAAAGGTAT CTCCGATTGC AGCTAAAGAA GCATATCAGC AAGGGAGAGC GGCATTTGAA
AAGAAAGATT ATGAAAAAGC ATTAACATTG TTAACGCAGG CTTATTCTTT TGGTGATCCA
GATGACAATA CACTATATTA TTTAGGTAAG ACGGAACAAG AGTTAGGTCA GTACGAGGAA
GCAAAAGCGT ATTATAACCA GATGCTAGAA AGTTTTCCAA ATTCTTCGCT GGCTAAGTAT
GCAAAGCAAC GTGTAAATGA TTTAGAATAA
 
Protein sequence
MNCPKCGNVV AVRRNRCEFC GKDLTIVRKT DRLSNTYYNR GLEKAKVRDL TGAIIMLKKS 
LEMNKRNTNA RNLLGLVFFE MGETVAALSE WVISKHFQAK DNDADVYIGA VQANPTKLDS
MNQAIKKYNI ALDSAKQGSD DLAIIQLKKV INLNPHFIRA LQLLALIYMK NNEFERARRC
LVKANKIDLA NTTTLRYLSE LNQLVSGGET TSTPYWSDGE VNPDPLGKPL SPISSYREEK
PNVWLFINLI LGVVIGVSVL FFLIVPTVKK NAQSEYLQKQ RDFDSDLLVY RTKLTSSEKE
VEDLKAKLAD KQKELDNIDI PEYDKTMYDS ILSAVYRYME LESTNSLTPE NTMEVADLLS
KVDPSKMENQ DAVKLFEMVK EKVSPIAAKE AYQQGRAAFE KKDYEKALTL LTQAYSFGDP
DDNTLYYLGK TEQELGQYEE AKAYYNQMLE SFPNSSLAKY AKQRVNDLE