7 homologs were found in PanDaTox collection
for query gene CPF_1054 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_1054  UBA/TS-N domain-containing protein  100 
 
 
176 aa  348  2e-95  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0735587  n/a   
 
 
-
 
NC_008261  CPF_1055  UBA/TS-N domain-containing protein  32.77 
 
 
182 aa  91.3  7e-18  Clostridium perfringens ATCC 13124  Bacteria  normal  0.604949  n/a   
 
 
-
 
NC_011830  Dhaf_2232  ubiquitin-associated- domain-containing protein  32.93 
 
 
183 aa  77.8  0.00000000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.488513  n/a   
 
 
-
 
NC_013203  Apar_1043  ubiquitin-associated- domain-containing protein  27.27 
 
 
180 aa  65.5  0.0000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_00290  UBA/TS-N domain-containing protein  25.99 
 
 
180 aa  63.9  0.000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.00000331222 
 
 
-
 
NC_009253  Dred_1536  ubiquitin-associated domain-containing protein  25.29 
 
 
151 aa  57.4  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.450314  n/a   
 
 
-
 
NC_013216  Dtox_3056  ubiquitin-associated- domain-containing protein  25.28 
 
 
153 aa  50.4  0.00001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.275328  hitchhiker  0.00000312149 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>