Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1055 |
Symbol | |
ID | 4202267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1204006 |
End bp | 1204554 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081936 |
Product | UBA/TS-N domain-containing protein |
Protein accession | YP_695501 |
Protein GI | 110799017 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.604949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGC TTAAACTTGT AGATAAGTTA AAGAATAAAG CTAATATAAG CTATGAAGAA GCTAAAGATG CTTTGGAAAA GAGCAACTGG GATATGCTAG AGGCTATGCT ATATTTAGAA GCACATGGAA AGGTGCAAAA GCCTTCCCTT AGTATATTTT ATACAAATGA ATCCAAAGAA AGTTACAATG AAAATGGAGA AGAAGTTAAT CTTAAAAAAG ATACAAATGA AAATAATTTT GAAAATAAAA ATAGTTTTGA AGGAGTTTTT GAAGCTATAT GCAAAGCTAT AGATACTTGC AATAATATAT TTATTGAAAT AATAAGAAAT AGTAGAGTGA TTTTAAAAAT TCCTTTTACT GTACTAATTG TACTTTTGTT TTTTGCATTT TGGATAGTTA TACCTTTAAT GATAATTGGA CTATTTTTTA ATATGGAATT TTTAGTATCT TCTAAAAAGA TTGATGTAGA TAAAATAAAC AAAGTATTTA AGGAAACATC AAAAGTAGTT AAAGACGTAA AAGATAAGTT TACTAACCAT ATGCACTAA
|
Protein sequence | MEKLKLVDKL KNKANISYEE AKDALEKSNW DMLEAMLYLE AHGKVQKPSL SIFYTNESKE SYNENGEEVN LKKDTNENNF ENKNSFEGVF EAICKAIDTC NNIFIEIIRN SRVILKIPFT VLIVLLFFAF WIVIPLMIIG LFFNMEFLVS SKKIDVDKIN KVFKETSKVV KDVKDKFTNH MH
|
| |