Gene CPF_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1054 
Symbol 
ID4201022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1202947 
End bp1203477 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content27% 
IMG OID638081935 
ProductUBA/TS-N domain-containing protein 
Protein accessionYP_695500 
Protein GI110801162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0735587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAA ATGAAATGAT TAATACTTTA GTTAGAAAGG CTAATATAAG TACGGAAGAG 
GCACAAGAAG TGCTAGAAAA ATGTAATTGG GACCTTTTAG ATGCTATTGT TTACTTAGAG 
AGAAGAGGAA AAGTAGAAAA CAAAGAAGTT ACAGCACTTA CTGTAGTTGA AGTAAAGGAA 
GAAAAAGAAG ATAAGAAAAA GCAGGATGAG AAATATGGTG GTATTGGAGA AATTGTTGGA 
AGAATATTTA AATTTATAGG TAAGATTATA AGAAAAGGAA CTAAAAATTT CCTTGAGATT 
AGAAAAGATA AGGAAAAACC AATAAGAATA TCTTTAACAA TATCAATTCT CTTCTTAATA 
TTTTTATCAG TACCAACTAT AGTTTTATTA ATCGTAGGAT TATTCTGTGG ATATAAATAT 
TCAATTTCAG GACCTGACTT TAATTATGAT GGAGTAAACA ATATTTTTGA AGAAGTATCA 
AAGTCAGCAA ATCATATTAA AAAAGATTTT AAAGAAGGAT ATGAAAAATA G
 
Protein sequence
MERNEMINTL VRKANISTEE AQEVLEKCNW DLLDAIVYLE RRGKVENKEV TALTVVEVKE 
EKEDKKKQDE KYGGIGEIVG RIFKFIGKII RKGTKNFLEI RKDKEKPIRI SLTISILFLI 
FLSVPTIVLL IVGLFCGYKY SISGPDFNYD GVNNIFEEVS KSANHIKKDF KEGYEK