7 homologs were found in PanDaTox collection
for query gene CPF_1055 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_1055  UBA/TS-N domain-containing protein  100 
 
 
182 aa  361  3e-99  Clostridium perfringens ATCC 13124  Bacteria  normal  0.604949  n/a   
 
 
-
 
NC_011830  Dhaf_2232  ubiquitin-associated- domain-containing protein  32.93 
 
 
183 aa  93.6  1e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.488513  n/a   
 
 
-
 
NC_008261  CPF_1054  UBA/TS-N domain-containing protein  30.48 
 
 
176 aa  82.4  0.000000000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0735587  n/a   
 
 
-
 
NC_009253  Dred_1536  ubiquitin-associated domain-containing protein  29.14 
 
 
151 aa  76.6  0.0000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.450314  n/a   
 
 
-
 
NC_013203  Apar_1043  ubiquitin-associated- domain-containing protein  31.35 
 
 
180 aa  72.8  0.000000000003  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_00290  UBA/TS-N domain-containing protein  30.39 
 
 
180 aa  68.6  0.00000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.00000331222 
 
 
-
 
NC_013216  Dtox_3056  ubiquitin-associated- domain-containing protein  23.6 
 
 
153 aa  50.1  0.00002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.275328  hitchhiker  0.00000312149 
 
 
-
 
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