10 homologs were found in PanDaTox collection
for query gene Bphyt_5214 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_5214  flagellar biosynthesis/type III secretory pathway protein-like protein  100 
 
 
243 aa  475  1e-133  Burkholderia phytofirmans PsJN  Bacteria  normal  0.210712  normal 
 
 
-
 
NC_007951  Bxe_A3124  flagellar biosynthesis/type III secretory pathway protein like  49.58 
 
 
318 aa  185  6e-46  Burkholderia xenovorans LB400  Bacteria  normal  0.0778311  hitchhiker  0.00270751 
 
 
-
 
NC_010552  BamMC406_4745  HrpE/YscL family type III secretion apparatus protein  29.93 
 
 
209 aa  50.1  0.00003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.528631 
 
 
-
 
NC_008391  Bamb_4223  HrpE/YscL family type III secretion apparatus protein  29.25 
 
 
209 aa  46.6  0.0003  Burkholderia ambifaria AMMD  Bacteria  normal  0.338425  normal 
 
 
-
 
NC_008061  Bcen_3518  Type III secretion system HrpE/YscL  26.54 
 
 
209 aa  43.9  0.003  Burkholderia cenocepacia AU 1054  Bacteria  decreased coverage  0.00253777  n/a   
 
 
-
 
NC_008543  Bcen2424_4848  HrpE/YscL family type III secretion apparatus protein  26.54 
 
 
209 aa  43.9  0.003  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000130597  normal 
 
 
-
 
NC_010515  Bcenmc03_5436  HrpE/YscL family type III secretion apparatus protein  26.54 
 
 
209 aa  43.9  0.003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0949322  normal  0.0915809 
 
 
-
 
NC_010086  Bmul_3746  HrpE/YscL family type III secretion apparatus protein  27.59 
 
 
209 aa  43.1  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0212499  hitchhiker  0.00667574 
 
 
-
 
NC_010157  YpAngola_B0063  type III secretion system protein  25.3 
 
 
210 aa  43.1  0.004  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2434  type III secretion system protein  28.67 
 
 
205 aa  42.4  0.007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
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