| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4745 |
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| Symbol | |
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| ID | 6180528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1881074 |
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| End bp | 1881703 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684504 |
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| Product | HrpE/YscL family type III secretion apparatus protein |
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| Protein accession | YP_001811415 |
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| Protein GI | 172063764 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.528631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTGG CTTTTCTGAT CACGAGCGAC AACCTGCAGC TGCTGTCGGA GCGCAAGGTG
CTCAAGGAGC GCGAATACGC GGCGCTGCTC GATGCATCCG CGGTGATCGC GACCGCGCGC
GACGAAGCCG CGCGCATCGT CGCCGACGCG CAGCGCGAGT TCGACAAGCG CCAGGCGGCC
GGCTACGACG AAGGCATGCG CCGCGCGCAG CGCGAGCATG CGGCGCAGAC CTATACGCAG
GCGCTGGCCG CCGCGCGCAC GATGGAGTCG ATGAAGGATT CGATGGCCGA TATCGTCGTG
AAGGCCGTGC GCGCGATCGT CGGCGAGATG CCCACGCAGA AGCTGTACGA GGCCGCGCTC
GCGCGGATCG CGCCGCTCGT GCGCGACGAA GCATTCCTGA TCGTGCGGGT CGCCCCAGGC
CGGCAGGACG AGATGCGCGA CGCGCTCGAG CGCGCGTTCG CCGGCCAGTC GAACCGGCAA
CGGATCCGCA TCGTCGAGGA TGCGCAGCTC GAACGTCACG CGTGCACGGT CGAGACGCCG
TCCGGACGCA TCGACGCGAG CCTCGACCTG CAGATCGACG CGCTGCGCCA GGCGATCCGC
CGCGACGCGC TGAAGGGCAC GACGCGATGA
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| Protein sequence | MGLAFLITSD NLQLLSERKV LKEREYAALL DASAVIATAR DEAARIVADA QREFDKRQAA
GYDEGMRRAQ REHAAQTYTQ ALAAARTMES MKDSMADIVV KAVRAIVGEM PTQKLYEAAL
ARIAPLVRDE AFLIVRVAPG RQDEMRDALE RAFAGQSNRQ RIRIVEDAQL ERHACTVETP
SGRIDASLDL QIDALRQAIR RDALKGTTR
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