Gene DvMF_2434 details

Gene Information

• Locus tag: DvMF_2434
• ID: 7174368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 3069549
• End bp: 3070166
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643540964
• Product: type III secretion system protein
• Protein accession: YP_002436843
• Protein GI: 218887522
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1317] Flagellar biosynthesis/type III secretory pathway protein
• TIGRFAM ID: [TIGR02499] type III secretion apparatus protein, HrpE/YscL family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 89
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCGCCC TGTTTCGACT GAATGCCAAC GCCGTGACCC CGGCACCCGG CCAGCGCGTG 
CTGAAGGCCG CCGACGCGGC CCTGCTGCGC GAGGCGCAGG ACATCCTGGA AGCCGCCCGC 
GCGCGCGCCG CCGAACTGGA ACTGGCGGCG CGGCAGGCCT ACGACCGCCG GGTGGAGGAA 
GGCTACCGCG ACGGGCTGGA GCAGGGGCGG CTGGAACATG CCGAAAAACT GCTGGAAACG 
ATCATGTCGT CGGTGGAATT CATCGAGGGC ATCGAGGCCA CCGTGGTCCG CGTGGTGACG 
GAGGCGGTGC GCAAGGTCAT CGGAGACCTT GGCGACGACG AGCGCATCGT GCGCATCGTG 
CGCACCGCGC TGGTGGCCGT GCGCAGCCAG CAGCGGGTGG TGGTGCGCGT GGCCCCGGCG 
GACGAGCGCG CCGTGACCGA AGCACTTGGG GCCATGCTGC AATCCGCGCC CGGCTCCGCC 
AGCTTTCTCG ACGTGGTGGC CGACCCCCGC CTGGAGCGCG GGGCCTGCCT GCTGGAAAGC 
GAACTGGGCG TGGTGGACGC CAGCCTGGAA ACCCAGCTGA AGGCCCTGGA GAACGCATTT 
CATGCCAAGA TCCGCTAA 

 

Protein sequence

MGALFRLNAN AVTPAPGQRV LKAADAALLR EAQDILEAAR ARAAELELAA RQAYDRRVEE 
GYRDGLEQGR LEHAEKLLET IMSSVEFIEG IEATVVRVVT EAVRKVIGDL GDDERIVRIV 
RTALVAVRSQ QRVVVRVAPA DERAVTEALG AMLQSAPGSA SFLDVVADPR LERGACLLES 
ELGVVDASLE TQLKALENAF HAKIR