21 homologs were found in PanDaTox collection
for query gene Bcenmc03_6354 on replicon NC_010512
Organism: Burkholderia cenocepacia MC0-3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010512  Bcenmc03_6354  hypothetical protein  100 
 
 
1166 aa  1722    Burkholderia cenocepacia MC0-3  Bacteria  decreased coverage  0.00361668  normal  0.829554 
 
 
-
 
NC_010084  Bmul_2536  hypothetical protein  49.1 
 
 
1860 aa  346  1e-93  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.116174 
 
 
-
 
NC_008544  Bcen2424_6766  PE-PGRS family protein  84.22 
 
 
1435 aa  312  2e-83  Burkholderia cenocepacia HI2424  Bacteria  normal  0.682763  normal  0.803816 
 
 
-
 
NC_008062  Bcen_6532  PE-PGRS family protein  84.07 
 
 
1435 aa  310  1.0000000000000001e-82  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS01904  signal peptide protein  40.76 
 
 
667 aa  178  6e-43  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.187558 
 
 
-
 
NC_008542  Bcen2424_0852  hypothetical protein  39.43 
 
 
828 aa  133  2.0000000000000002e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0369  hypothetical protein  37.8 
 
 
991 aa  132  3e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0823  hypothetical protein  38.69 
 
 
913 aa  128  8.000000000000001e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.160742  hitchhiker  0.00320377 
 
 
-
 
NC_007510  Bcep18194_A3941  hypothetical protein  39.23 
 
 
941 aa  124  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  0.725312  normal  0.0191769 
 
 
-
 
NC_009076  BURPS1106A_3158  hypothetical protein  30.23 
 
 
689 aa  82.4  0.00000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.393526  n/a   
 
 
-
 
NC_007434  BURPS1710b_3178  hypothetical protein  33.56 
 
 
628 aa  82  0.00000000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.110039  n/a   
 
 
-
 
NC_008836  BMA10229_A2740  hypothetical protein  29.32 
 
 
668 aa  79.3  0.0000000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.317986  n/a   
 
 
-
 
NC_009080  BMA10247_1866  hypothetical protein  29.32 
 
 
668 aa  79.3  0.0000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2819  methyl-accepting chemotaxis sensory transducer  18.48 
 
 
1474 aa  60.5  0.0000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3121  hypothetical protein  31.58 
 
 
497 aa  52.8  0.00003  Burkholderia pseudomallei 668  Bacteria  normal  0.320306  n/a   
 
 
-
 
NC_009076  BURPS1106A_1783  hypothetical protein  36.32 
 
 
533 aa  51.2  0.0001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1761  hypothetical protein  36.22 
 
 
534 aa  50.8  0.0001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1948  hypothetical protein  21.82 
 
 
2487 aa  50.8  0.0001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0909817 
 
 
-
 
NC_007434  BURPS1710b_1936  hypothetical protein  36.11 
 
 
635 aa  49.7  0.0003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.128348  n/a   
 
 
-
 
NC_007947  Mfla_1284  hypothetical protein  30.25 
 
 
637 aa  46.6  0.003  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00000117205  decreased coverage  0.00000270892 
 
 
 
NC_010511  M446_6067  hypothetical protein  23.69 
 
 
3296 aa  44.7  0.009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>