7 homologs were found in PanDaTox collection
for query gene BamMC406_3174 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_3174  hypothetical protein  100 
 
 
633 aa  1293    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008757  Pnap_4438  hypothetical protein  27.42 
 
 
601 aa  133  1.0000000000000001e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.13249 
 
 
-
 
NC_011894  Mnod_2531  hypothetical protein  30.28 
 
 
363 aa  82  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2418  hypothetical protein  28.46 
 
 
363 aa  70.5  0.00000000009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.435913 
 
 
-
 
NC_009485  BBta_4964  hypothetical protein  30.47 
 
 
382 aa  64.7  0.000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3473  hypothetical protein  26.67 
 
 
356 aa  49.3  0.0002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.145252  normal 
 
 
-
 
NC_013441  Gbro_2516  hypothetical protein  25.7 
 
 
401 aa  45.8  0.003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.15116  n/a   
 
 
-
 
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