8 homologs were found in PanDaTox collection
for query gene Avi_9875 on replicon NC_011986
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011986  Avi_9875  hypothetical protein  100 
 
 
284 aa  575  1.0000000000000001e-163  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_011206  Lferr_0235  domain of unknown function DUF1738  38.04 
 
 
1716 aa  106  4e-22  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1304  domain of unknown function DUF1738  37.3 
 
 
1457 aa  104  2e-21  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  hitchhiker  0.00000000590213 
 
 
-
 
NC_011761  AFE_1615  DNA primase TraC  36.76 
 
 
1449 aa  101  2e-20  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3226  domain of unknown function DUF1738  35.39 
 
 
178 aa  93.6  4e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.60789  normal 
 
 
-
 
NC_010509  Mrad2831_6349  hypothetical protein  31.52 
 
 
310 aa  90.1  4e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  0.482225 
 
 
-
 
NC_011665  Sbal223_4528  hypothetical protein  27.17 
 
 
442 aa  65.1  0.000000001  Shewanella baltica OS223  Bacteria  normal  0.103833  normal  0.57888 
 
 
-
 
NC_004349  SO_A0039  hypothetical protein  26.49 
 
 
364 aa  62.8  0.000000007  Shewanella oneidensis MR-1  Bacteria  normal  n/a   
 
 
-
 
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